Commit 07efbc31 authored by peguerin's avatar peguerin
Browse files

readme update

parent 7f53813b
......@@ -90,4 +90,29 @@ Apply curation
mkbdr validate --fasta resources/test/raw.fasta \
--curate curated_taxon.csv
--output_prefix "test_curated"
```
Generate a curation csv file
```
mkbdr curegen --fasta test_raw_faulty_taxon.fasta \
--output_prefix "test"
```
Specify the globalnames database to query
```
mkbdr curegen --fasta test_raw_faulty_taxon.fasta \
--output_prefix "test" \
--database_globalnames 'Catalogue of Life'
```
_______________________________________________________________________________
crash test
```
python3 mkbdr validate --fasta teleo_ok.fasta --curate curated_taxon.csv --output_prefix "truc"
```
\ No newline at end of file
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