Commit 272fa4ae authored by peguerin's avatar peguerin
Browse files

readme update

parent 17473728
......@@ -32,6 +32,12 @@ scripts to create our own reference database with our own sequences only and usi
* formatted FASTA file
* .ldx new nodes for missing taxid into the taxonomy to link to existing genus/family taxid
`raw fasta` --> validate --> `valide fasta` `faulty_format fasta` `faulty_taxon fasta`
`faulty_taxon fasta` --> curate (actuellement Laetitia qui fait ce job) --> `curated_taxon csv`
verifier et corriger à la main le tableau `curated_taxon csv`
`raw fasta` `curated_taxon csv` --> validate --> `valide fasta` et mise à jour de la taxonomy
## Environment
To create environments with required softwares:
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