Commit 76e547bb authored by peguerin's avatar peguerin
Browse files

readme update

parent b300c83c
......@@ -19,7 +19,7 @@ Scripts to convert FASTA files into reference database with NCBI taxonomy.
* [species representative records FASTA file](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_database/-/wikis/Files-definition#representative-sequences)
* [NCBI taxonomy files](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_database/-/wikis/Files-definition#ncbi-taxonomies-file)
* [Curation table file](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_database/-/wikis/Files-definition#curation-file)
3. [Quick start]()
3. [Quick start](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_database/-/wikis/home#quick-start)
4. Running MKBDR
* [Module validate - Check taxonomy and format validity](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_database/-/wikis/Validate)
* [Module cureGen - Curation Generation](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_database/-/wikis/Curegen)
......@@ -27,7 +27,7 @@ Scripts to convert FASTA files into reference database with NCBI taxonomy.
* [Apply taxonomy curation](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_database/-/wikis/Validate#basic-curation)
* [Add new species to NCBI taxonomy](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_database/-/wikis/Validate#using-a-local-ncbi-taxonomy-performs-a-curation-which-add-new-species-to-your-local-taxonomy)
4. [Output results](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_database/-/wikis/Files-definition#output-files)
5. [How-to guide]()
5. [How-to guide](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_database/-/wikis/How-to-guide)
6. [Reference](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_database/-/wikis/home#credits)
7. [Metabarcoding context - discussion to go further]()
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