Commit 985d7488 authored by peguerin's avatar peguerin
Browse files

readme update

parent d695851b
......@@ -32,10 +32,13 @@ scripts to create our own reference database with our own sequences only and usi
* formatted FASTA file
* .ldx new nodes for missing taxid into the taxonomy to link to existing genus/family taxid
`raw fasta` --> validate --> `valide fasta` `faulty_format fasta` `faulty_taxon fasta`
`faulty_taxon fasta` --> curate (actuellement Laetitia qui fait ce job) --> `curated_taxon csv`
verifier et corriger à la main le tableau `curated_taxon csv`
`raw fasta` `curated_taxon csv` --> validate --> `valide fasta` et mise à jour de la taxonomy
1. `raw fasta` --> validate --> `valide fasta` `faulty_format fasta` `faulty_taxon fasta`
2. `faulty_taxon fasta` --> curate (actuellement Laetitia qui fait ce job) --> `curated_taxon csv`
3. verifier et corriger à la main le tableau `curated_taxon csv`
4. `raw fasta` `curated_taxon csv` --> validate --> `valide fasta` et mise à jour de la taxonomy
## Environment
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment