Commit c1335327 authored by peguerin's avatar peguerin
Browse files

readme update

parent d8fb5aa9
...@@ -27,3 +27,29 @@ scripts to create our own reference database with our own sequences only and usi ...@@ -27,3 +27,29 @@ scripts to create our own reference database with our own sequences only and usi
* formatted FASTA file * formatted FASTA file
* .ldx new nodes for missing taxid into the taxonomy to link to existing genus/family taxid * .ldx new nodes for missing taxid into the taxonomy to link to existing genus/family taxid
## Environment
To create environments with required softwares:
```
conda env create -f envs/obitools_envs.yaml
conda env create -f envs/pylib_cbdr.yaml
```
* Obitools
```
conda activate obitools
```
* Required python libraries to build custom reference database
```
conda activate pylib_cbdr
```
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