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edna
custom_reference_database
Commits
ddfbe7a0
Commit
ddfbe7a0
authored
Mar 09, 2021
by
peguerin
Browse files
just fix typo
parent
fb63871e
Changes
1
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Inline
Side-by-side
valide.py
View file @
ddfbe7a0
...
...
@@ -168,7 +168,7 @@ ncbi = NCBITaxa()
#ncbi = NCBITaxa(taxdump_file=path.abspath(localTaxdumpArchive))
## vertebrate
vertdesc
=
ncbi
.
get_descendant_taxa
(
7742
,
intermediate_nodes
=
True
,
rank_limit
=
'species'
,
collapse_subspecies
=
False
)
vertdesc
=
ncbi
.
get_descendant_taxa
(
7742
,
intermediate_nodes
=
True
,
rank_limit
=
'species'
,
collapse_subspecies
=
False
)
#vertleaf = vertdesc.get_leaves(is_leaf_fn=None)
vert
=
ncbi
.
translate_to_names
(
vertdesc
)
zip_iterator
=
zip
(
vertdesc
,
vert
)
...
...
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