|
|
|
|
|
|
|
|
|
|
|
mkbdr curegen --database_globalnames 'Catalogue of Life' --output_prefix res_raw --fasta res_raw_faulty_taxon.fasta
|
|
|
|
|
|
|
|
mkbdr validate --fasta tests/data/raw.fasta --curate res_raw_curation.csv --output_prefix res_curated
|
|
|
|
|
|
|
|
mkbdr init_ncbi_taxdump --folder_path customtaxonomy/ --decompress
|
|
|
|
|
|
|
|
mkbdr validate --fasta tests/data/raw.fasta --curate res_raw_curation.csv --ncbi_taxonomy_edition customtaxonomy/ --output_prefix res_taxo_curated
|
|
|
|
|
|
|
|
|
