Validate.md

@@ -25,7 +25,7 @@ This table summarizes the command-line arguments which are using by `mkbdr valid
 # Example of commands
 
 
-#### The simplest case: 
+### The simplest case: 
 
 
 ```
@@ -42,7 +42,7 @@ res_faulty_taxonomy.fasta
 
 
 
-#### Basic curation:
+### Basic curation:
 
 * To perform curation of names without editing NCBI taxonomy files
 
@@ -54,7 +54,7 @@ mkbdr validate --fasta raw.fasta --output_prefix res --curate curation_table.csv
 `curation_table.csv` is read to perform curation on species name of records in `raw.fasta`.
 
 
-#### Using a local NCBI taxonomy
+### Using a local NCBI taxonomy
 
 * To run mkbdr with your own NCBI taxonomy located at path/to/ncbi_taxo you have to add the argument `--ncbi_taxdump_load` to your command for the first time:
 
@@ -86,7 +86,7 @@ mkbdr validate --fasta raw.fasta \
 
 
 
-#### Using a local NCBI taxonomy, performs a curation which add new species to your local taxonomy
+### Using a local NCBI taxonomy, performs a curation which add new species to your local taxonomy
 
 * To run mkbdr in order to add new species, you have to allow edition of local NCBI taxonomy files with the argument `--ncbi_taxdump_edition`. To specify the location of NCBI taxonomy folder to edit, add the argument `--ncbi_taxdump`. To apply a curation, add the argument `--curate`. Thorough description of curation CSV file is available [here](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_database/-/wikis/Files-definition#curation-file).