Validate.md

@@ -38,12 +38,12 @@ mkbdr validate --fasta raw.fasta --output_prefix res --curate curation_table.csv
 * To run mkbdr with your own NCBI taxonomy located at path/to/ncbi_taxo you have to add the argument `--ncbi_taxdump_load` to your command for the first time:
 
 ```
-mkbdr validate --fasta raw.fasta --output_prefix res --ncbi_taxdump path/to/ncbi_taxo
+mkbdr validate --fasta raw.fasta --output_prefix res --ncbi_taxdump path/to/ncbi_taxo --ncbi_taxdump_load
 ```
 
 
 
-ete3 will load the files located in path/to/ncbi_taxo and stores the NCBI taxonomy tree object in your home folder. Once the NCBI taxonomy is locally loaded, you can simply run the command:
+ete3 will load the files located in `path/to/ncbi_taxo` and stores the NCBI taxonomy tree object in your home folder. Once the NCBI taxonomy is locally loaded, you can simply run the command:
 
 
 ```
@@ -52,11 +52,11 @@ mkbdr validate --fasta raw.fasta --output_prefix res
 
 The default ncbi taxonomy handled by mkbdr is now your local NCBI taxonomy.
 
-If you want to change your local NCBI taxonomy again. For instance you want to load the taxonomies located at path/to/an/other/ncbi_taxo2:
+If you want to change your local NCBI taxonomy again. For instance you want to load the taxonomies located at `path/to/an/other/ncbi_taxo2`:
 
 
 ```
-mkbdr validate --fasta raw.fasta --output_prefix res --ncbi_taxdump path/to/an/other/ncbi_taxo2
+mkbdr validate --fasta raw.fasta --output_prefix res --ncbi_taxdump path/to/an/other/ncbi_taxo2 --ncbi_taxdump_load
 ```