Commit 0386a574 authored by Bastien Macé's avatar Bastien Macé
Browse files

add links

parent c6ac16d1
......@@ -247,6 +247,8 @@ obiclean -r 0.05 -H Aquarium_2.fasta > Aquarium_2.clean.fasta
# here, the command only returns only the sequences tagged "head" by the algorithm, and the chosen ratio is 0.05
```
For more details on this OBITOOLS processing step, see the original publication [here](https://doi.org/10.1111/1755-0998.12428).
<a name="step22"></a>
### IV - 2 - DADA2 processing step (Pipelines B)
......@@ -273,6 +275,8 @@ uniquesToFasta(uniqueSeqs, paste0("PipelineB_", sample.names[k], ".fasta"))
# creates a new ".fasta" file constaining the ASVs
```
For more details on this DADA2 processing step, see the original publication [here](https://doi.org/10.1038/nmeth.3869).
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### IV - 3 - SWARM processing step (Pipelines C)
......
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