Commit 52730817 authored by peguerin's avatar peguerin
Browse files

readme update

parent 86b1677e
......@@ -82,7 +82,7 @@ You can use the absolute path of the folder of your reference database as the `/
Once you generated your reference database, you need the `db_{prefix}.fasta` file (see Results section above).
Type the following command to convert your reference database into STAMPA format :
python3 scripts/ -f db_{prefix}.fasta -o /path/to/reference_database_stampa.fasta
python3 scripts/ -f /path/to/db_{prefix}.fasta -o /path/to/reference_database_stampa.fasta
This command generates a file `/path/to/reference_database_stampa.fasta` which you can use as a reference database for the pipeline :
* [bash_swarm](
\ No newline at end of file
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment