readme update

README.md

@@ -80,8 +80,9 @@ You can use the absolute path of the folder of your reference database as the `/
 ## Reference database in STAMPA format
 
 Once you generated your reference database, you need the `db_{prefix}.fasta` file (see Results section above).
-To convert your reference database into STAMPA format :
+Type the following command to convert your reference database into STAMPA format :
 ```
 python3 scripts/formatDB_obifasta_to_stampa.py -f db_{prefix}.fasta -o /path/to/reference_database_stampa.fasta
 ```
-It will generate a file `/path/to/reference_database_stampa.fasta` which you can use as a reference database into the pipeline [bash_swarm](https://gitlab.mbb.univ-montp2.fr/edna/bash_swarm)
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+It generates a file `/path/to/reference_database_stampa.fasta` which you can use as a reference database for the pipeline :
+* [bash_swarm](https://gitlab.mbb.univ-montp2.fr/edna/bash_swarm)
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