input cat

73d9958f · peguerin · b85acf8b · 73d9958f
Commit 73d9958f authored Nov 14, 2019 by peguerin
--- a/02-demultiplex/Snakefile
+++ b/02-demultiplex/Snakefile
@@ -23,7 +23,7 @@ include: "../00-rules/filtered.smk"
 ### Concatenate sequences from each sample of the same run
 rule cat_samples:
    input:
-        '03-cleaned/{sample}.c.r.l.u.fasta'
+        '03-cleaned/{run}*.c.r.l.u.fasta'
    params:
        '03-cleaned/{run}*.c.r.l.u.fasta'
    output: