Commit 9d89ef03 authored by peguerin's avatar peguerin
Browse files

folder for each run

parent d7b0e3e5
...@@ -21,7 +21,7 @@ rule split_sequences: ...@@ -21,7 +21,7 @@ rule split_sequences:
input: input:
'03-assign_sequences/{run}.ali.assigned.fastq' '03-assign_sequences/{run}.ali.assigned.fastq'
params: params:
'../02-demultiplex/01-raw/{run}_sample_' '../02-demultiplex/01-raw/{run}/'
singularity: singularity:
config["container"] config["container"]
log: log:
......
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment