Commit fcd91de3 authored by peguerin's avatar peguerin
Browse files

finalement script de base

parent 8f5eb2bf
......@@ -15,9 +15,6 @@ rule all:
expand('../99-log/05-dereplicate_samples/{run}/{sample}.log',zip, run=RUNS, sample=SAMPLES),
expand('../99-log/06-goodlength_samples/{run}/{sample}.log',zip, run=RUNS, sample=SAMPLES),
expand('../99-log/07-clean_pcrerr/{run}/{sample}.log',zip, run=RUNS, sample=SAMPLES),
expand('../99-log/08-rm_internal_samples/{run}/{sample}.log',zip, run=RUNS, sample=SAMPLES),
expand('../99-log/09-cat_samples/{run}/{sample}.log',zip, run=RUNS, sample=SAMPLES)
expand('../99-log/08-rm_internal_samples/{run}/{sample}.log',zip, run=RUNS, sample=SAMPLES)
include: "../00-rules/filter_samples.smk"
include: "../00-rules/cat_samples.smk"
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