Commit 2e7f9235 authored by peguerin's avatar peguerin
Browse files

rename count params

parent ce24429f
...@@ -18,7 +18,7 @@ blacklist: ...@@ -18,7 +18,7 @@ blacklist:
illuminapairedend: illuminapairedend:
s_min: 40 s_min: 40
good_length_samples: good_length_samples:
count : 1 seq_count : 1
seq_length : 1 seq_length : 1
clean_pcrerr_samples: clean_pcrerr_samples:
r : 0.05 r : 0.05
......
...@@ -35,7 +35,7 @@ blacklist: ...@@ -35,7 +35,7 @@ blacklist:
illuminapairedend: illuminapairedend:
s_min: 40 s_min: 40
good_length_samples: good_length_samples:
count : 1 seq_count : 1
seq_length : 1 seq_length : 1
clean_pcrerr_samples: clean_pcrerr_samples:
r : 0.05 r : 0.05
......
...@@ -5,6 +5,11 @@ fichiers: ...@@ -5,6 +5,11 @@ fichiers:
rapidrun: 01_infos/all_samples.tsv rapidrun: 01_infos/all_samples.tsv
folder_fastq: /media/superdisk/edna/donnees/test/tiny_malpelo-fakarava_rapidrun/ folder_fastq: /media/superdisk/edna/donnees/test/tiny_malpelo-fakarava_rapidrun/
folder_refdb: /media/superdisk/edna/donnees/reference_database/ref141/ folder_refdb: /media/superdisk/edna/donnees/reference_database/ref141/
dat:
mamm: /media/superdisk/edna/donnees/test/tiny_malpelo-fakarava_rapidrun/Mamm.dat
teleo: /media/superdisk/edna/donnees/test/tiny_malpelo-fakarava_rapidrun/Teleo.dat
chond: /media/superdisk/edna/donnees/test/tiny_malpelo-fakarava_rapidrun/Chond.dat
vert: /media/superdisk/edna/donnees/test/tiny_malpelo-fakarava_rapidrun/Vert.dat
blacklist: blacklist:
projet: projet:
- dummy_run - dummy_run
...@@ -15,7 +20,7 @@ blacklist: ...@@ -15,7 +20,7 @@ blacklist:
illuminapairedend: illuminapairedend:
s_min: 40 s_min: 40
good_length_samples: good_length_samples:
count : 1 seq_count : 1
seq_length : 1 seq_length : 1
clean_pcrerr_samples: clean_pcrerr_samples:
r : 0.05 r : 0.05
......
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