Commit 9d0dc6e4 authored by peguerin's avatar peguerin
Browse files

fix input path file

parent 1c36c1dd
......@@ -13,7 +13,7 @@ dfMulti =pandas.read_csv("../results/01_settings/all_demultiplex.csv", sep=",")
dfMultiChecked = dfMulti
for thisDemultiplex in dfMulti.demultiplex:
file_sample = "../03_demultiplex/02_raw/"+thisDemultiplex+".fasta"
file_sample = "../results/03_demultiplex/02_raw/"+thisDemultiplex+".fasta"
if not os.path.exists(file_sample):
print("WARNING: ", file_sample," not found. We removed it from this analysis.")
dfMultiChecked = dfMultiChecked[dfMultiChecked.demultiplex != thisDemultiplex]
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