fix input path file

04_filter_samples/Snakefile

@@ -13,7 +13,7 @@ dfMulti =pandas.read_csv("../results/01_settings/all_demultiplex.csv", sep=",")
 dfMultiChecked = dfMulti
 
 for thisDemultiplex in dfMulti.demultiplex:
-    file_sample = "../03_demultiplex/02_raw/"+thisDemultiplex+".fasta"
+    file_sample = "../results/03_demultiplex/02_raw/"+thisDemultiplex+".fasta"
     if not os.path.exists(file_sample):
         print("WARNING: ", file_sample," not found. We removed it from this analysis.")
         dfMultiChecked = dfMultiChecked[dfMultiChecked.demultiplex != thisDemultiplex]