Commit df83bb5c authored by peguerin's avatar peguerin
Browse files

fix csv

parent d63f651e
......@@ -55,7 +55,7 @@ rapidrunfile = config['fichiers']['rapidrun']
#rapidrunfile="01_infos/all_samples.tsv"
## read 'rapidrun' .tsv file
dfr =pandas.read_csv(rapidrunfile, sep="\t")
dfr =pandas.read_csv(rapidrunfile, sep=";")
dfr.columns = ['plaque', 'run','sample','projet','marker']
## remove blacklisted projets
blacklistedProjets = config['blacklist']['projet']
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment