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edna
snakemake_rapidrun_obitools
Commits
ead412d3
Commit
ead412d3
authored
Jun 16, 2020
by
peguerin
Browse files
fix writting dat file path
parent
8d078065
Changes
1
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03_demultiplex/Snakefile
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ead412d3
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@@ -64,7 +64,7 @@ for projmarkerrun in dfRunMarker['projMarkRun'].unique():
thisProj = projmarkerrun.split("/")[0]
thisMarker = projmarkerrun.split("/")[1]
thisRun = projmarkerrun.split("/")[2]
fileName = "00_dat/" + str(thisProj) + "_" + str(thisMarker) + "_" + str(thisRun) + ".tsv"
fileName = "
../results/03_demultiplex/
00_dat/" + str(thisProj) + "_" + str(thisMarker) + "_" + str(thisRun) + ".tsv"
dfprojmarkerrunMulti = dfMulti[(dfMulti.projet == thisProj) & (dfMulti.marker == thisMarker) & (dfMulti.run == thisRun)]
if dfprojmarkerrunMulti.empty == False:
print("Writing sample description files for project and marker", thisProj, thisMarker, ":", fileName)
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