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edna
snakemake_rapidrun_obitools
Commits
fd71f81a
Commit
fd71f81a
authored
Apr 27, 2021
by
peguerin
Browse files
fix path of folder results split_fastq_by_sample rule output
parent
953a7eaa
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1
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rules/split_fastq_by_sample.smk
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fd71f81a
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@@ -17,4 +17,4 @@ rule split_fastq_by_sample:
log:
'logs/07_split_fastq_by_sample/{demultiplex}.log'
shell:
'''mkdir -p {params.dir}; obisplit -p "{params.dir}" -t sample --fasta {input} 2> {log}; mkdir -p 07_split_fastq_by_sample/flags/; touch {output};'''
'''mkdir -p {params.dir}; obisplit -p "{params.dir}" -t sample --fasta {input} 2> {log}; mkdir -p
results/
07_split_fastq_by_sample/flags/; touch {output};'''
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