Commits · 26f459ec6b05d356fe49bb35ceac65ba4651167a · edna / snakemake_rapidrun_obitools

23 Jun, 2020 3 commits
- changelog update · 26f459ec
  peguerin authored Jun 23, 2020
  
  26f459ec
- command using conda · 73793776
  peguerin authored Jun 23, 2020
  
  73793776
- rename min length parameters · a0ed35eb
  peguerin authored Jun 23, 2020
  
  a0ed35eb
22 Jun, 2020 8 commits
- set minimum length of sequences at 31 bp · 0bb81624
  peguerin authored Jun 22, 2020
  
  0bb81624
- add conda env · d5760922
  peguerin authored Jun 22, 2020
  
  d5760922
- envs conda obitools · 21783deb
  peguerin authored Jun 22, 2020
  
  21783deb
- add cython conda dep · d0d3678a
  peguerin authored Jun 22, 2020
  
  d0d3678a
- relative path conda · 34ba2e2a
  peguerin authored Jun 22, 2020
  
  34ba2e2a
- test ecotag with sdx files · d318747e
  peguerin authored Jun 22, 2020
  
  d318747e
- fix path tuto fasta · 7d1b9027
  peguerin authored Jun 22, 2020
  
  7d1b9027
- add half threads on ecotag · 09118a25
  peguerin authored Jun 22, 2020
  
  09118a25
17 Jun, 2020 1 commit
- bdr pathway into HOME · 754de8b0
  peguerin authored Jun 17, 2020
  
  754de8b0
16 Jun, 2020 17 commits
- change path to HOME · 6cd36201
  peguerin authored Jun 16, 2020
  
  6cd36201
- readme update · 11a24ad4
  peguerin authored Jun 16, 2020
  
  11a24ad4
- readme update · 59b98475
  peguerin authored Jun 16, 2020
  
  59b98475
- remove folder rules · 44a3e14e
  peguerin authored Jun 16, 2020
  
  44a3e14e
- update rules step 05 · b0ca6bc6
  peguerin authored Jun 16, 2020
  
  b0ca6bc6
- remove final table folder · 8de0800f
  peguerin authored Jun 16, 2020
  
  8de0800f
- update command snakemake · 1af30749
  peguerin authored Jun 16, 2020
  
  1af30749
- update relative path · 74a2ee39
  peguerin authored Jun 16, 2020
  
  74a2ee39
- cleaning step 05 · 76036434
  peguerin authored Jun 16, 2020
  
  76036434
- fix input path file · 9d0dc6e4
  peguerin authored Jun 16, 2020
  
  9d0dc6e4
- fix path · 1c36c1dd
  peguerin authored Jun 16, 2020
  
  1c36c1dd
- fix input assembly path · c22cea93
  peguerin authored Jun 16, 2020
  
  c22cea93
- new rules with new path wildcards · 55ae0d82
  peguerin authored Jun 16, 2020
  
  55ae0d82
- define new rules · 8ff01002
  peguerin authored Jun 16, 2020
  
  8ff01002
- cleaning · d418dd03
  peguerin authored Jun 16, 2020
  
  d418dd03
- fix writting dat file path · ead412d3
  peguerin authored Jun 16, 2020
  
  ead412d3
- remove folders · 8d078065
  peguerin authored Jun 16, 2020
  
  8d078065
15 Jun, 2020 11 commits
- add settings step · 0516c674
  peguerin authored Jun 15, 2020
  
  0516c674
- edit path all_demutliplex.csv in results · 2251d286
  peguerin authored Jun 15, 2020
  
  2251d286
- change path all_demultiplex.csv · b3ac05d9
  peguerin authored Jun 15, 2020
  
  b3ac05d9
- init results settings folder · 0800b9c2
  peguerin authored Jun 15, 2020
  
  0800b9c2
- init 01_settings · 64207aa6
  peguerin authored Jun 15, 2020
  
  64207aa6
- cleaning · a1d575d1
  peguerin authored Jun 15, 2020
  
  a1d575d1
- individual rules for step 03 · 168e4c87
  peguerin authored Jun 15, 2020
  
  168e4c87
- edit path snakefile · c7040b60
  peguerin authored Jun 15, 2020
  
  c7040b60
- rename resources · ac98e5d3
  peguerin authored Jun 15, 2020
  
  ac98e5d3
- fix results path · 21eadb6c
  peguerin authored Jun 15, 2020
  
  21eadb6c
- change path of all_demultiplex.csv · ccb3e571
  peguerin authored Jun 15, 2020
  
  ccb3e571