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edna
snakemake_rapidrun_obitools
Commits
snakemake_rapidrun_obitools
27 Apr, 2021
4 commits
update changelog
· 40e285c2
peguerin
authored
Apr 27, 2021
40e285c2
modify custombdr config params
· a25120be
peguerin
authored
Apr 27, 2021
a25120be
fix custombdr config
· aaa5c701
peguerin
authored
Apr 27, 2021
aaa5c701
fix path of folder results split_fastq_by_sample rule output
· fd71f81a
peguerin
authored
Apr 27, 2021
fd71f81a
08 Apr, 2021
4 commits
readme update
· 953a7eaa
peguerin
authored
Apr 08, 2021
953a7eaa
readme update
· 0a10d34c
peguerin
authored
Apr 08, 2021
0a10d34c
readme update
· f16887b8
peguerin
authored
Apr 08, 2021
f16887b8
set to False custom taxonomy
· be9d281c
peguerin
authored
Apr 08, 2021
be9d281c
07 Apr, 2021
4 commits
custom reference database taxonomic assignment rule
· f656bb80
peguerin
authored
Apr 07, 2021
f656bb80
scripts link projmarkrun to projmarkrun_custom
· dfed488b
peguerin
authored
Apr 07, 2021
dfed488b
test config with custom reference database input
· a0cb5aee
peguerin
authored
Apr 07, 2021
a0cb5aee
custom reference database
· de2524ae
peguerin
authored
Apr 07, 2021
de2524ae
11 Feb, 2021
2 commits
fix SettingWithCopyWarning pandas dataframe
· 747a0c8c
peguerin
authored
Feb 11, 2021
747a0c8c
change path of files
· 6688a0b5
peguerin
authored
Feb 11, 2021
6688a0b5
10 Feb, 2021
15 commits
gitignore update
· ab5d8156
peguerin
authored
Feb 10, 2021
ab5d8156
init folder test
· 902f77ca
peguerin
authored
Feb 10, 2021
902f77ca
gitignore update
· f7d37e70
peguerin
authored
Feb 10, 2021
f7d37e70
clean test folder
· 8cc35c3c
peguerin
authored
Feb 10, 2021
8cc35c3c
update changelog
· e140e9a7
peguerin
authored
Feb 10, 2021
e140e9a7
update gitignore
· 277a0cf5
peguerin
authored
Feb 10, 2021
277a0cf5
one single command
· cfc6059e
peguerin
authored
Feb 10, 2021
cfc6059e
add config for test data
· 901b9f5e
peguerin
authored
Feb 10, 2021
901b9f5e
the whole workflow is into one single snakefile
· 5173e85b
peguerin
authored
Feb 10, 2021
5173e85b
remove useless script clean.sh
· 2ee63776
peguerin
authored
Feb 10, 2021
2ee63776
reorganise files
· 36147d6f
peguerin
authored
Feb 10, 2021
36147d6f
update license
· 02887f7c
peguerin
authored
Feb 10, 2021
02887f7c
scripts merge samples into runs
· 2ae93640
peguerin
authored
Feb 10, 2021
2ae93640
clean logs
· 0cb41596
peguerin
authored
Feb 10, 2021
0cb41596
clean results
· f7d4c98e
peguerin
authored
Feb 10, 2021
f7d4c98e
16 Sep, 2020
8 commits
readme update
· f3fefaa9
peguerin
authored
Sep 16, 2020
f3fefaa9
update changelog
· 3d5b5bd4
peguerin
authored
Sep 16, 2020
3d5b5bd4
update marbecstation config file
· dc0e093f
peguerin
authored
Sep 16, 2020
dc0e093f
update gitignore
· fca057e4
peguerin
authored
Sep 16, 2020
fca057e4
update gitignore
· afc627ce
peguerin
authored
Sep 16, 2020
afc627ce
snakemake handle CLASSIC format
· c8fde049
peguerin
authored
Sep 16, 2020
c8fde049
edit config RAPIDRUN malpelo
· b7a009f5
peguerin
authored
Sep 16, 2020
b7a009f5
add config file tutorial CLASSIC rhone
· 124dfcef
peguerin
authored
Sep 16, 2020
124dfcef
07 Sep, 2020
1 commit
fix separator dat files
· 111f9d3f
vmarques
authored
Sep 07, 2020
111f9d3f
04 Sep, 2020
1 commit
fix csv
· df83bb5c
peguerin
authored
Sep 04, 2020
df83bb5c
01 Sep, 2020
1 commit
changelog update
· d63f651e
peguerin
authored
Sep 01, 2020
d63f651e