Commits · master · edna / snakemake_rapidrun_obitools

02 Nov, 2021 1 commit
- Update config_test_rapidrun.yaml · cdfa6fca
  vmarques authored Nov 02, 2021
  
  cdfa6fca
27 Apr, 2021 4 commits
- update changelog · 40e285c2
  peguerin authored Apr 27, 2021
  
  40e285c2
- modify custombdr config params · a25120be
  peguerin authored Apr 27, 2021
  
  a25120be
- fix custombdr config · aaa5c701
  peguerin authored Apr 27, 2021
  
  aaa5c701
- fix path of folder results split_fastq_by_sample rule output · fd71f81a
  peguerin authored Apr 27, 2021
  
  fd71f81a
08 Apr, 2021 4 commits
- readme update · 953a7eaa
  peguerin authored Apr 08, 2021
  
  953a7eaa
- readme update · 0a10d34c
  peguerin authored Apr 08, 2021
  
  0a10d34c
- readme update · f16887b8
  peguerin authored Apr 08, 2021
  
  f16887b8
- set to False custom taxonomy · be9d281c
  peguerin authored Apr 08, 2021
  
  be9d281c
07 Apr, 2021 4 commits
- custom reference database taxonomic assignment rule · f656bb80
  peguerin authored Apr 07, 2021
  
  f656bb80
- scripts link projmarkrun to projmarkrun_custom · dfed488b
  peguerin authored Apr 07, 2021
  
  dfed488b
- test config with custom reference database input · a0cb5aee
  peguerin authored Apr 07, 2021
  
  a0cb5aee
- custom reference database · de2524ae
  peguerin authored Apr 07, 2021
  
  de2524ae
11 Feb, 2021 2 commits
- fix SettingWithCopyWarning pandas dataframe · 747a0c8c
  peguerin authored Feb 11, 2021
  
  747a0c8c
- change path of files · 6688a0b5
  peguerin authored Feb 11, 2021
  
  6688a0b5
10 Feb, 2021 15 commits
- gitignore update · ab5d8156
  peguerin authored Feb 10, 2021
  
  ab5d8156
- init folder test · 902f77ca
  peguerin authored Feb 10, 2021
  
  902f77ca
- gitignore update · f7d37e70
  peguerin authored Feb 10, 2021
  
  f7d37e70
- clean test folder · 8cc35c3c
  peguerin authored Feb 10, 2021
  
  8cc35c3c
- update changelog · e140e9a7
  peguerin authored Feb 10, 2021
  
  e140e9a7
- update gitignore · 277a0cf5
  peguerin authored Feb 10, 2021
  
  277a0cf5
- one single command · cfc6059e
  peguerin authored Feb 10, 2021
  
  cfc6059e
- add config for test data · 901b9f5e
  peguerin authored Feb 10, 2021
  
  901b9f5e
- the whole workflow is into one single snakefile · 5173e85b
  peguerin authored Feb 10, 2021
  
  5173e85b
- remove useless script clean.sh · 2ee63776
  peguerin authored Feb 10, 2021
  
  2ee63776
- reorganise files · 36147d6f
  peguerin authored Feb 10, 2021
  
  36147d6f
- update license · 02887f7c
  peguerin authored Feb 10, 2021
  
  02887f7c
- scripts merge samples into runs · 2ae93640
  peguerin authored Feb 10, 2021
  
  2ae93640
- clean logs · 0cb41596
  peguerin authored Feb 10, 2021
  
  0cb41596
- clean results · f7d4c98e
  peguerin authored Feb 10, 2021
  
  f7d4c98e
16 Sep, 2020 8 commits
- readme update · f3fefaa9
  peguerin authored Sep 16, 2020
  
  f3fefaa9
- update changelog · 3d5b5bd4
  peguerin authored Sep 16, 2020
  
  3d5b5bd4
- update marbecstation config file · dc0e093f
  peguerin authored Sep 16, 2020
  
  dc0e093f
- update gitignore · fca057e4
  peguerin authored Sep 16, 2020
  
  fca057e4
- update gitignore · afc627ce
  peguerin authored Sep 16, 2020
  
  afc627ce
- snakemake handle CLASSIC format · c8fde049
  peguerin authored Sep 16, 2020
  
  c8fde049
- edit config RAPIDRUN malpelo · b7a009f5
  peguerin authored Sep 16, 2020
  
  b7a009f5
- add config file tutorial CLASSIC rhone · 124dfcef
  peguerin authored Sep 16, 2020
  
  124dfcef
07 Sep, 2020 1 commit
- fix separator dat files · 111f9d3f
  vmarques authored Sep 07, 2020
  
  111f9d3f
04 Sep, 2020 1 commit
- fix csv · df83bb5c
  peguerin authored Sep 04, 2020
  
  df83bb5c