test section

main.sh

@@ -36,9 +36,10 @@ snakemake --use-conda --configfile ${CONFIGFILE} --cores ${CORES}
 
 
 ############################################################################### 
-## rename files
-# bash rename.sh 06_assignment
 ## clean
 #snakemake --configfile $CONFIGFILE -s Snakefile --delete-all-output --dry-run
 #snakemake --configfile "../"$CONFIGFILE -s Snakefile --delete-all-output --rerun-incomplete
+## test
+#conda activate snakemake_rapidrun
+#rm -rf results; mkdir results; snakemake --use-conda --configfile config/config_test_rapidrun.yaml --cores 4