Commits · f84dd4f0dafef34d4c495743315b265e28e5c5ad · edna / snakemake_rapidrun_swarm

08 Sep, 2020 19 commits
- readme update · f84dd4f0
  peguerin authored Sep 08, 2020
  
  f84dd4f0
- readme update · 9ae43072
  peguerin authored Sep 08, 2020
  
  9ae43072
- readme update · dbdc4469
  peguerin authored Sep 08, 2020
  
  dbdc4469
- folder demultiplex · 899a5775
  peguerin authored Sep 08, 2020
  
  899a5775
- Merge branch 'develop' into 'master' · d4bc4db0
  peguerin authored Sep 08, 2020
```
Develop

See merge request !2
```
  d4bc4db0
- init config file for tutorial · 4de5fddc
  peguerin authored Sep 08, 2020
  
  4de5fddc
- fix path · 49a9278f
  peguerin authored Sep 08, 2020
  
  49a9278f
- tutorial folder · b3fd0375
  peguerin authored Sep 08, 2020
  
  b3fd0375
- update config · ea99bc56
  peguerin authored Sep 08, 2020
  
  ea99bc56
- update main script · 53b4605c
  peguerin authored Sep 08, 2020
  
  53b4605c
- some new rules for cutadapt · 1764b456
  peguerin authored Sep 08, 2020
  
  1764b456
- env cutadapt · 514edbde
  peguerin authored Sep 08, 2020
  
  514edbde
- capture primer sequence · 6c650f98
  peguerin authored Sep 08, 2020
  
  6c650f98
- update cutadapt commands · f54de311
  peguerin authored Sep 08, 2020
  
  f54de311
- write barcode.fasta files for cutadapt · 3447299c
  peguerin authored Sep 08, 2020
  
  3447299c
- cp marker duplicate barcode files because cutadapt proceed a barcode only once · 0587de75
  peguerin authored Sep 08, 2020
  
  0587de75
- check files not generated by cutadapt because no barcode · 532e0240
  peguerin authored Sep 08, 2020
  
  532e0240
- gitignore update · 79dd0ee7
  peguerin authored Sep 08, 2020
  
  79dd0ee7
- gitignore update · d318082a
  peguerin authored Sep 08, 2020
  
  d318082a
07 Sep, 2020 1 commit
- barcodes folder settings · 837dd50c
  peguerin authored Sep 07, 2020
  
  837dd50c
01 Sep, 2020 14 commits
- changelog update · a08bffbd
  peguerin authored Sep 01, 2020
  
  a08bffbd
- add autorship · df5186fa
  peguerin authored Sep 01, 2020
  
  df5186fa
- add autorship · 34b335dd
  peguerin authored Sep 01, 2020
  
  34b335dd
- cleaning · 1829e2bc
  peguerin authored Sep 01, 2020
  
  1829e2bc
- update main command · a1120084
  peguerin authored Sep 01, 2020
  
  a1120084
- reorganise workflow annotation · 1162235b
  peguerin authored Sep 01, 2020
  
  1162235b
- reorganise step 5 workflow clustering · 56918b53
  peguerin authored Sep 01, 2020
  
  56918b53
- set conda env · fba6536a
  peguerin authored Sep 01, 2020
  
  fba6536a
- reorganise step 04 · 007e328c
  peguerin authored Sep 01, 2020
  
  007e328c
- reorganise step 04 · 22647f98
  peguerin authored Sep 01, 2020
  
  22647f98
- fix path demultiplex · 056a5f0e
  peguerin authored Sep 01, 2020
  
  056a5f0e
- fix path demultiplex · 88e469e6
  peguerin authored Sep 01, 2020
  
  88e469e6
- reorganise step 04_cat_quality · dfb3d105
  peguerin authored Sep 01, 2020
  
  dfb3d105
- Add LICENSE · 6c62b59a
  peguerin authored Sep 01, 2020
  
  6c62b59a
31 Aug, 2020 6 commits
- fix demultiplex · db1cdb50
  peguerin authored Aug 31, 2020
  
  db1cdb50
- fix demultiplex · 0e77b053
  peguerin authored Aug 31, 2020
  
  0e77b053
- fix demultiplex · d2f17c80
  peguerin authored Aug 31, 2020
  
  d2f17c80
- fix demultiplex · bc764c4f
  peguerin authored Aug 31, 2020
  
  bc764c4f
- fix demultiplex · d979804a
  peguerin authored Aug 31, 2020
  
  d979804a
- fix demultiplex · 8bd41108
  peguerin authored Aug 31, 2020
  
  8bd41108