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  • edna
  • snakemake_rapidrun_swarmsnakemake_rapidrun_swarm
  • Issues
  • #36
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Created Jun 07, 2021 by peguerin@peguerinOwner

taxonomic_assignment med_coastal lambda failed because nonetype object

Salut PE ! J'espère que tu t'en sors avec les démarches et le déménagement ! J'ai un petit soucis sur la pipeline. J'essaie de lancer la pipeline entière sur la Med mais ça me sort une erreur que je comprend pas. Tu peux jeter un oeil au nohup dans /media/superdisk/edna/working/med_coastal/snakemake_rapidrun_swarm quand tu auras 5 min stp

InputFunctionException in line 5 of /media/superdisk/edna/working/med_coastal/sn
akemake_rapidrun_swarm/rules/taxonomic_assignment.smk:
Error:
  TypeError: 'NoneType' object is not subscriptable
Wildcards:
  projmark=Blank/teleo
Traceback:
  File "/media/superdisk/edna/working/med_coastal/snakemake_rapidrun_swarm/rules/taxonomic_assignment.smk", line 12, in <lambda>

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