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  • edna
  • snakemake_rapidrun_swarmsnakemake_rapidrun_swarm
  • Issues

  • Open 7
  • Closed 8
  • All 15
New issue
  • Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title
  • prepare_spygen enhancements ideas
    #37 · created Dec 01, 2021 by vmarques   enhancement
    • 0
    updated Dec 01, 2021
  • simplify workflow to have less steps and less heavy intermediate results   2 of 4 tasks completed
    #34 · created Jun 04, 2021 by vmarques   enhancement
    • 2
    updated Jun 04, 2021
  • Add multicore option for demultiplexing
    #33 · created Jun 04, 2021 by vmarques   enhancement
    • CLOSED
    • 4
    updated Jun 04, 2021
  • prepare spygen file - ameliorations   8 of 9 tasks completed
    #32 · created Apr 21, 2021 by vmarques   enhancement
    • 4
    updated Apr 22, 2021
  • fastqc step
    #27 · created Feb 19, 2021 by peguerin   enhancement
    • CLOSED
    • 0
    updated Feb 23, 2021
  • run snakemake on cluster Sun Grid Engine MBB
    #23 · created Jan 19, 2021 by peguerin   enhancement
    • 0
    updated Jan 19, 2021
  • deploy the workflow on ELIXIR cloud VM
    #22 · created Jan 19, 2021 by peguerin   enhancement
    • 0
    updated Jan 19, 2021
  • subworkflow
    #15 · created Jan 12, 2021 by peguerin   enhancement
    • CLOSED
    • 0
    updated Jan 19, 2021
  • add test unit
    #14 · created Jan 12, 2021 by peguerin   enhancement
    • 4
    updated Jan 19, 2021
  • add benchmarks
    #13 · created Jan 12, 2021 by peguerin   enhancement
    • 0
    updated Jan 12, 2021
  • Simplify data export
    #12 · created Dec 18, 2020 by vmarques   enhancement
    • CLOSED
    • 1
    updated Jan 20, 2021
  • Ease the data download
    #9 · created Oct 09, 2020 by vmarques   enhancement
    • CLOSED
    • 1
    updated Jan 19, 2021
  • Change name files in 06_ folder
    #5 · created Apr 16, 2020 by vmarques   enhancement
    • CLOSED
    • 6
    updated Jan 20, 2021
  • Ajouter base de ref custom
    #4 · created Feb 13, 2020 by vmarques   enhancement
    • CLOSED
    • 0
    updated Jun 04, 2021
  • remove run or projet or sample using a file
    #1 · created Feb 05, 2020 by peguerin   enhancement
    • CLOSED
    • 1
    updated Feb 06, 2020