Commit 0b4d4c6c authored by eortega's avatar eortega
Browse files

Last description of reminding files.

parent 49794d53
......@@ -19,7 +19,7 @@ Files:
* README.txt
* requirements_py-env.txt
......@@ -160,7 +160,7 @@ We tried out different parameters, this script is more a reminder of the command
This is the current script being used, the previous are old versions, before starting a git.
* :
* : This is for debuging. The inputs and outputs are in the folder `scripts/debug`
This is the analysis script.
......@@ -180,3 +180,38 @@ To run from ipython:
## The other scripts
The commands used to launch the scripts up here as well as the supplementary commands to separate the different data, extract and all other action is written here.
This file :-P
### requirements_py-env.txt
File used by the script ``
It contains the list of libraries and versions used in python for this analysis.
This is a python library which is imported by ``
It contains allows to import data from vcf files and put it in a pandas dataframe format to ease the analyses.
It works with objects: The _attributes_ contain information and the _methods_ are internal functions for that object. For example "remove control SNPs"
The last class allows to create a heatmap with matplotlib.
A more extended documentation will be made in the future
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