Explore projects

Rscripts and link to our server to download and assign environmental data to sample according to their coordinates

GSSA

Codes Pierre-Edouard Guerin wrote for the scientific paper "Predicting genotype environmental range from genome–environment associations"

OTU clustering with SWARM on RAPIDRUN data encapsulated in SNAKEMAKE

This project has for goal to filtrate efficiently eDNA sequences after PCR amplification and NGS, in order to eliminate the false sequences generated by these technologies.

Analysis around palinurus ortus

This project is aimed at providing a list of "Ethical' journals where ISEM's researchers are used to publishing there works.

Seek positions of variants onto genome and check if they are on an annotated region e.g. coding region. Then seek the proteic function of the gene

This workflow will use a pseudo aligner (Kallisto or Salmon) to quantify transcript abundance and test for differential expression.

Using Git in a team: learn and practice Git and discover its features !

web-app interface investigating database Barcode of Life BOLD geo referenced mitochondrial DNA barcode.