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mirror of modulefiles repository on gitlabpriv (but there is no reason to let this repository in a private state)

Codes Pierre-Edouard Guerin wrote for the scientific paper "Predicting genotype environmental range from genome–environment associations"

This project has for goal to filtrate efficiently eDNA sequences after PCR amplification and NGS, in order to eliminate the false sequences generated by these technologies.

OTU clustering with SWARM on RAPIDRUN data encapsulated in SNAKEMAKE

This project is based on the idea that gathering similar sequences allows to faithfully study them by eliminating sequences generated from PCR or NGS errors.

Formation R + git + Rmd

Tool to parse and summarize VFC files with different plots

A program to detect potential cross contaminations in HTS assembled transcriptomes using expression level quantification