Explore projects

GBS workflow using dDocent. This was designed to process GBS data from SEACONNECT project.

DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE

Collection of scripts to build a reference database.

Ceci est un dépôt exemple pour git.

DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE

genepop

This project aims to compare twelve bioinformatics pipelines based on five existing metabarcoding programs to make recommendations for data management in intraspecific variability studies using environmental DNA.

design primers for intrapopulation metabarcoding

Source code to fit a competitive Lotka-Volterra Model to tri-specific time series (using Rstan).

système expert de choix d’un modèle halieutique de production comportant une variable environnementale, puis ajustement et validation statistique du modèle.