Explore projects

data test to check metabarcoding workflow processing

DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE

Understand the NCBI database and to do request using entrez and Rentrez

design primers for intrapopulation metabarcoding

The first step to begin with obitools and Bash

Ceci est un dépôt exemple pour git.

Here is a version of the pipeline "only_obitools" using snakemake workflow management system.

Required dependencies for the Seascape genomics class.

Tool to parse and summarize VFC files with different plots

Rscripts and link to our server to download and assign environmental data to sample according to their coordinates