GitLab

Menu

Projects Groups Snippets

Loading...
Help
Sign in

edna
Group information
- Group information
- Activity
- Labels
- Members
Issues 23
- Issues 23
- List
- Board
- Milestones
Merge requests 0
- Merge requests 0
Packages & Registries
- Packages & Registries
- Package Registry

Collapse sidebar

edna
Issues

Open 23
Closed 49
All 72

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title

download_mitochrondrion_ncbi.sh: some incomplete records (server MARBEC)

reference_database#9 · created May 09, 2022 by mbruno bug
- 1
updated May 09, 2022
The EMBL database is no longer updated 2 of 3 tasks completed

reference_database#8 · created May 02, 2022 by mbruno
- 0
updated May 02, 2022
Error running pipeline

snakemake_rapidrun_obitools#14 · created Feb 02, 2022 by vmarques
- 2
updated Feb 17, 2022
prepare_spygen enhancements ideas

snakemake_rapidrun_swarm#37 · created Dec 01, 2021 by vmarques enhancement
- 0
updated Dec 01, 2021
Enhancements

snakemake_rapidrun_obitools#13 · created Nov 02, 2021 by vmarques
- 1
updated Feb 21, 2022
Cleaning NCBI

reference_database#6 · created Oct 29, 2021 by vmarques enhancement
- 0
updated Oct 29, 2021
Use less space

snakemake_rapidrun_obitools#12 · created Jul 12, 2021 by vmarques
- 4
updated Apr 01, 2022
simplify workflow to have less steps and less heavy intermediate results 2 of 4 tasks completed

snakemake_rapidrun_swarm#34 · created Jun 04, 2021 by vmarques enhancement
- 2
updated Jun 04, 2021
ENA releases are no more - update needed

reference_database#5 · created May 01, 2021 by vmarques
- 2
updated Oct 29, 2021
prepare spygen file - ameliorations 8 of 9 tasks completed

snakemake_rapidrun_swarm#32 · created Apr 21, 2021 by vmarques enhancement
- 4
updated Apr 22, 2021
error empty files all.fasta step 14 & 15

snakemake_rapidrun_swarm#29 · created Feb 22, 2021 by vmarques bug
- 1
updated Feb 22, 2021
fastqc step

snakemake_rapidrun_obitools#10 · created Feb 19, 2021 by peguerin enhancement
- 0
updated Feb 19, 2021
add job ressources control in config file

snakemake_rapidrun_obitools#9 · created Feb 18, 2021 by vmarques enhancement
- 2
updated Nov 22, 2021
Update

reference_database#4 · created Feb 18, 2021 by vmarques
- 0
updated Feb 18, 2021
run snakemake on cluster Sun Grid Engine MBB

snakemake_rapidrun_swarm#23 · created Jan 19, 2021 by peguerin enhancement
- 0
updated Jan 19, 2021
deploy the workflow on ELIXIR cloud VM

snakemake_rapidrun_swarm#22 · created Jan 19, 2021 by peguerin enhancement
- 0
updated Jan 19, 2021
RAPIDRUN mode tutorial

snakemake_rapidrun_swarm#21 · created Jan 19, 2021 by peguerin documentation
- 0
updated Jan 19, 2021
CLASSIC mode tutorial

snakemake_rapidrun_swarm#20 · created Jan 19, 2021 by peguerin documentation
- 1
updated Nov 22, 2021
add test unit

snakemake_rapidrun_swarm#14 · created Jan 12, 2021 by peguerin enhancement
- 4
updated Jan 19, 2021
add benchmarks

snakemake_rapidrun_swarm#13 · created Jan 12, 2021 by peguerin enhancement
- 0
updated Jan 12, 2021

Prev
1
2
Next