Skip to content
GitLab
Menu
Projects
Groups
Snippets
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
jlopez
RPACIB
Commits
1683c6fa
Commit
1683c6fa
authored
Nov 28, 2018
by
jlopez
Browse files
Add workflow yaml
parent
cab5ac5b
Changes
2
Show whitespace changes
Inline
Side-by-side
R/helper_functions.R
View file @
1683c6fa
...
...
@@ -121,7 +121,6 @@ getInstallToolPackageWorkflow <- function(tool, containerType) {
res
<-
c
(
res
,
getInstallToolPackageBioContainer
(
tt
,
containerType
))
}
res
<-
c
(
res
,
paste0
(
"\t"
,
tools
$
install
,
collapse
=
'\n'
))
print
(
res
)
return
(
res
)
}
}
...
...
workflow.yaml
0 → 100644
View file @
1683c6fa
workflows
:
[
{
name
:
"
myWorkflow"
,
version
:
"
0.0.1"
,
author
:
"
MBB"
,
description
:
"
my
super
workflow"
,
documentation
:
"
https://www.google.com/"
,
install
:
[
"
ls"
],
dependencies
:
[{
name
:
"
samtools"
,
version
:
"
1.2"
},
{
name
:
"
searchgui"
,
version
:
"
2.1.4"
}]}
,{
name
:
"
myWorkflow"
,
version
:
"
0.0.2"
,
author
:
"
MBB"
,
description
:
"
my
super
workflow"
,
documentation
:
"
https://www.google.com/"
,
install
:
[
"
ls"
],
dependencies
:
[{
name
:
"
samtools"
,
version
:
"
1.2"
},
{
name
:
"
searchgui"
,
version
:
"
2.1.4"
}]}
]
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment