Commit 408cdcb2 authored by mmassaviol's avatar mmassaviol
Browse files

Update sag yaml configuration file as an attribute

parent 07508cc1
#!/usr/bin Rscript
# This script will take a SAG yaml configuration file and generate a ShinyApp
# Accepts one parameters: path to sag yaml configuration file
# Usage: Rscript /path/to/sag.yaml
args = commandArgs(trailingOnly=TRUE)
source("tools.R")
library(yaml)
path_yml <- "/home/mbb/Documents/waw/workflows/Metabarcoding/sag.yaml"
#path_tools <- "/home/mbb/Documents/waw/tools"
path_yml <- args[1]
APP <<- yaml.load_file(path_yml)$App
......
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