Commit c43bb5de authored by mmassaviol's avatar mmassaviol
Browse files

Remove predefined tools

parent 9c7cf884
......@@ -297,10 +297,6 @@ generate_pages_server <- function() {
if(length(boxes) > 1){
res <- res + "\nconditionalPanel(condition = \"input.select"+content$name+" == '"+box$name+"'\","
}
#if(box$defined == TRUE) {
# box <- get_predefined_box(box, APP$pages[[x]]$name)
#}
res <- generate_page_box(panel, box, res)
......
{
name: "biotoolA",
title: "Tool biotoolA :",
status: "success",
content: [
{name: "param1", type: "text", value: "", label: "Input Param1 :"},
{name: "param8", type: "checkbox", value: TRUE, label: "Checkbox 1"},
{name: "param9", type: "checkbox", value: FALSE, label: "Checkbox 2"},
{name: "testButton", type: "button", icon: "", class: "btn btn-success", label: "Test"},
]
}
{
name: "biotoolB",
title: "Tool biotoolB :",
status: "success",
content: [
{name: "param1", type: "text", value: "", label: "Input Param1 :"},
{name: "param2", type: "slider", min: 0, max: 100, step: 1, value: [50], label: "Slider param2 :"},
{name: "param3", type: "slider", min: 10, max: 20, step: 0.1, value: [11.8, 19.6], label: "Slider param3 :"},
{name: "param8", type: "checkbox", value: TRUE, label: "Checkbox 1"},
{name: "param9", type: "checkbox", value: FALSE, label: "Checkbox 2"},
{name: "testButton", type: "button", icon: "", class: "btn btn-success", label: "Test"},
]
}
{
name: "fastqc",
title: "FastQC :",
status: "success",
content: [
{name: "fastqc_threads", type: "slider", min: 1, max: 16, step: 1, value: [1], label: "Number of threads to use :"},
]
}
{
name: "kallisto",
title: "kallisto :",
status: "success",
content: [
{name: "kallisto_index_input", type: "file", multiple: FALSE, accept: [".fasta", ".fasta.gz"], label: "Choose reference fasta file: "},
{name: "help_strand", type: "help", label: "For strand specific mode choose --fr-stranded if the first read is forward and choose --rf-stranded if the first read is reverse"},
{name: "kallisto_quant_pe_stranded", type: "radio", selected: "No", choices: ["No", "--fr-stranded", "--rf-stranded"], label: "Strand specific mode: "},
{name: "kallisto_quant_threads", type: "slider", min: 1, max: 16, step: 1, value: [1], label: "Number of threads to use: "},
]
}
{
name: "salmon",
title: "salmon :",
status: "success",
content: [
{name: "salmon_index_input", type: "file", multiple: FALSE, accept: [".fasta", ".fasta.gz"], label: "Choose reference fasta file :"},
]
}
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