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jlopez
wicopa
Commits
203f875f
Commit
203f875f
authored
Mar 12, 2020
by
jlopez
Browse files
Refactor Bioconductor getPackages
parent
093394d7
Changes
2
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Inline
Side-by-side
getPackages.php
View file @
203f875f
...
...
@@ -72,7 +72,7 @@ if(strpos($distrib, ':') !== false) {
else
if
(
$distrib
==
"CPAN"
)
{
$result
=
findCPANPackage
(
$distrib
,
$version_num
,
$version_name
,
$filter
,
$limit
,
false
);
}
else
if
(
$distrib
==
"CRAN"
)
{
else
if
(
$distrib
==
"CRAN"
||
$distrib
==
"Bioconductor"
)
{
$result
=
findRPackage
(
$distrib
,
$version_num
,
$version_name
,
$filter
,
$limit
,
false
);
}
else
{
...
...
package.php
View file @
203f875f
...
...
@@ -295,6 +295,44 @@ function findRPackage($os_name, $version_num, $version_name, $keyword, $limit, $
fclose
(
$h
);
}
}
else
if
(
$repos
==
"bioc"
)
{
$url_packages
=
"https://www.bioconductor.org/packages/release/bioc/"
;
$doc
=
getDocument
(
$url_packages
);
$trs
=
$doc
->
getElementsByTagName
(
'tr'
);
$size
=
$trs
->
length
-
1
;
$index
=
0
;
for
(
$i
=
1
;
$i
<=
$size
;
$i
++
)
{
$name
=
$trs
[
$i
]
->
childNodes
[
1
]
->
nodeValue
;
if
(
strpos
(
$name
,
$keyword
)
!==
false
)
{
$description
=
$trs
[
$i
]
->
childNodes
[
5
]
->
nodeValue
;
$version
=
""
;
$link
=
"https://www.bioconductor.org/packages/release/bioc/html/"
.
$name
.
".html"
;
$other
=
$trs
[
$i
]
->
childNodes
[
3
]
->
nodeValue
;
$package
=
new
Package
(
$name
,
$version
,
$description
,
$link
,
$other
);
$results
[]
=
$package
;
$index
++
;
}
if
(
$index
==
$limit
)
{
break
;
}
}
}
return
$results
;
...
...
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