Commit d524750f authored by khalid's avatar khalid
Browse files

Force the order of parsing fasta_mod files in output_fasta

parent e3d7f3bd
......@@ -4,8 +4,9 @@ if [ $OUTPUTLEVEL == "1" ]; then
elif [ $OUTPUTLEVEL == "2" ]; then
echo -e "\nWriting categorized transcriptomes - all categories (it might take some time)"
for fasta in $out/*.fasta_mod; do
ref=`basename $fasta .fasta_mod`
#for fasta in $out/*.fasta_mod; do
for ref in "${orders[@]}"
fasta=$out/$ref".fasta_mod"
echo -e "\t$ref"
# version awk
......
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