Commits · master · khalid / CroCoTest

27 Jun, 2018 4 commits
- MAJ readme to v1.2 (3) · 6a559a60
  psimion authored Jun 27, 2018
  
  6a559a60
- MAJ readme to v1.2 (2) · 5cf4e9d0
  psimion authored Jun 27, 2018
  
  5cf4e9d0
- MAJ readme to v1.2 · c27973f4
  psimion authored Jun 27, 2018
  
  c27973f4
- various cleaning of scripts prior to v1.2 transition · 543bb272
  psimion authored Jun 27, 2018
  
  543bb272
26 Jun, 2018 3 commits
- saving fasta_oneline files · 6009469b
  psimion authored Jun 26, 2018
  
  6009469b
- default tool is now kallisto · 2e7e306a
  psimion authored Jun 26, 2018
  
  2e7e306a
- completely re-written output_fasta.sh script · 8795a3aa
  psimion authored Jun 26, 2018
  
  8795a3aa
25 May, 2018 1 commit
- draft for read cleaning option · 7b065be1
  psimion authored May 25, 2018
  
  7b065be1
18 May, 2018 3 commits
- various cleanups · c4b5d1aa
  psimion authored May 18, 2018
  
  c4b5d1aa
- last changes : conf.file now works · 95a7ca66
  psimion authored May 18, 2018
  
  95a7ca66
- various minor changes · 18430303
  psimion authored May 18, 2018
  
  18430303
17 May, 2018 5 commits
- various small changes: trying to make conf.file work · 7f2d7bd3
  psimion authored May 17, 2018
  
  7f2d7bd3
- Force the order of transcripts in /tmp/ALL_transcripts.* · bd02a2aa
  khalid authored May 17, 2018
  
  bd02a2aa
- Force the order of transcripts in /tmp/ALL_transcripts.* · bd73142e
  khalid authored May 17, 2018
  
  bd73142e
- Force the order of transcripts in /tmp/ALL_transcripts.ctgs · 646f8aec
  khalid authored May 17, 2018
  
  646f8aec
- Force the order of parsing fasta_mod files in output_fasta · d524750f
  khalid authored May 17, 2018
  
  d524750f
16 May, 2018 3 commits
- many changes: correction if 0 contam; trying to use conf_file for input;... · e3d7f3bd
  psimion authored May 16, 2018
```
many changes: correction if 0 contam; trying to use conf_file for input; introduction to using vsearch
```
  e3d7f3bd
- many changes: correction if 0 contam; trying to use conf_file for input;... · 8908ebf6
  psimion authored May 16, 2018
```
many changes: correction if 0 contam; trying to use conf_file for input; introduction to using vsearch
```
  8908ebf6
- Add a solution to parse the contigs in the same order as in the config file · d595607c
  khalid authored May 16, 2018
  
  d595607c
08 Mar, 2018 1 commit
- Add GNU licence text · 97541c4d
  khalid authored Mar 08, 2018
  
  97541c4d
07 Mar, 2018 1 commit
- Prise en charge d'un fichier de config. listant les fichiers à analyser · ad18ccc9
  khalid authored Mar 07, 2018
  
  ad18ccc9
06 Mar, 2018 6 commits
- Disbled B2, Salmon and Hapmap indexing · 6c932ed0
  khalid authored Mar 06, 2018
  
  6c932ed0
- very minor 1.1 changes · 90e52ae7
  psimion authored Mar 06, 2018
  
  90e52ae7
- minor correction of profiles sorting · 9df31e3c
  psimion authored Mar 06, 2018
  
  9df31e3c
- readme minor updates 2 · db585d44
  psimion authored Mar 06, 2018
  
  db585d44
- readme minor updates · 8e1edbcb
  psimion authored Mar 06, 2018
  
  8e1edbcb
- readme major updates & fasta output bug corrected · 1a94b14a
  psimion authored Mar 06, 2018
  
  1a94b14a
31 Jan, 2018 1 commit
- With Polo changes · dc23b0ce
  khalid authored Jan 31, 2018
  
  dc23b0ce
08 Jan, 2018 1 commit
- Initial commit · 6a48544b
  khalid authored Jan 08, 2018
  
  6a48544b