Commits · master · khalid / radseqref

16 Apr, 2021 1 commit
- Deal with samples with 0 mapped reads in gstacks · 50eb229d
  khalid authored Apr 16, 2021
  
  50eb229d
13 Apr, 2021 2 commits
- Solve problem with population post report generation whene there are missing snp · a13452ab
  khalid authored Apr 13, 2021
  
  a13452ab
- step toward dealing with empty fastq files · f02d915a
  khalid authored Apr 13, 2021
  
  f02d915a
12 Apr, 2021 7 commits
- get_individual now deal with the case of paired barcodes · 1c961f4d
  khalid authored Apr 12, 2021
  
  1c961f4d
- get_individual now deal with the case of paired barcodes · db99f5a7
  khalid authored Apr 12, 2021
  
  db99f5a7
- get_individual now deal with the case of paired barcodes · bb3a8fee
  khalid authored Apr 12, 2021
  
  bb3a8fee
- get_individual now deal with the case of paired barcodes · 6d02b5fe
  khalid authored Apr 12, 2021
  
  6d02b5fe
- popmap with shinyFile datapath format · 964130d5
  khalid authored Apr 12, 2021
  
  964130d5
- popmap with shinyFile datapath format · 2401347a
  khalid authored Apr 12, 2021
  
  2401347a
- Show port number for local deployment · 0ef41608
  khalid authored Apr 12, 2021
  
  0ef41608
12 Mar, 2021 1 commit
- Add some infos on howto use the workflow · dc639b5e
  khalid authored Mar 12, 2021
  
  dc639b5e
09 Mar, 2021 2 commits
- remove bug for bowtie SE params · 64b1dbc4
  khalid authored Mar 09, 2021
  
  64b1dbc4
- Changes to deal with empty samples · 81c86bc7
  khalid authored Mar 09, 2021
  
  81c86bc7
05 Mar, 2021 2 commits
- Resolve bug fro bowtie SE rule · c05d3708
  khalid authored Mar 05, 2021
  
  c05d3708
- Add a constraint in wild cards for samples and ids · 8ff6bd9b
  khalid authored Mar 05, 2021
  
  8ff6bd9b
04 Mar, 2021 5 commits
- Solve problem with shinyFile datapath format · a1e44975
  khalid authored Mar 04, 2021
  
  a1e44975
- debug SAMPLES access · ea749116
  khalid authored Mar 04, 2021
  
  ea749116
- Add a script for local deployment · bfbf7c33
  khalid authored Mar 04, 2021
  
  bfbf7c33
- Add missing commands to Dockerfile · 20fb0969
  khalid authored Mar 04, 2021
  
  20fb0969
- Debug step_outputs for null steps · c92565d6
  khalid authored Mar 04, 2021
  
  c92565d6
06 Feb, 2020 2 commits
- Debug heatmap generation · c83f85f4
  mmassaviol authored Feb 06, 2020
  
  c83f85f4
- Update radseqref (update stacks to 2.5) · e1c8a657
  mmassaviol authored Feb 06, 2020
  
  e1c8a657
18 Dec, 2019 2 commits
- Use multistage docker build · 9a9ad1c4
  mmassaviol authored Dec 18, 2019
```
Fast build when only workflow files changes
```
  9a9ad1c4
- Update deploys · ba69b679
  mmassaviol authored Dec 18, 2019
  
  ba69b679
12 Dec, 2019 1 commit
- Added a workflow diagram · 8bdbf7aa
  khalid authored Dec 12, 2019
  
  8bdbf7aa
10 Dec, 2019 4 commits
- Add necessary code to run in ISEM cluster · 07ef147d
  khalid authored Dec 10, 2019
  
  07ef147d
- Added missing files · 53aceb58
  khalid authored Dec 10, 2019
  
  53aceb58
- First true commit · 1fc84b7e
  khalid authored Dec 10, 2019
  
  1fc84b7e
- Initial commit · ea460336
  khalid authored Dec 10, 2019
  
  ea460336