Commit 3b1d81ea authored by RomainFeron's avatar RomainFeron
Browse files

Added comment line to map output file

parent 86ccfbd8
......@@ -103,6 +103,12 @@ void Map::generate_output() {
// Open output file and output the header
this->output_file = open_output(this->parameters.output_file_path);
this->output_file << "#source:radsex-map;min_depth:" << parameters.min_depth <<
";min_qual:" << parameters.map_min_quality <<
";min_freq:" << parameters.map_min_frequency <<
";signif_threshold:" << parameters.signif_threshold <<
";bonferroni:" << std::boolalpha << (not parameters.disable_correction) <<
";n_markers:" << this->results.n_markers << "\n";
this->output_file << "Contig\tPosition\tLength\tMarker_id\tBias\tP\tCorrectedP\tSignif\n";
if (not this->parameters.disable_correction) {
......
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