Commit 7fa05cc1 authored by RomainFeron's avatar RomainFeron
Browse files

minor makefile typo

parent 3e85c5b0
......@@ -6,7 +6,7 @@ CXXFLAGS += -Wall -std=c++11 $(OPTCXXFLAGS)
CFLAGS += -Wall -Wno-maybe-uninitialized
LDFLAGS += -pthread -lstdc++ -lz -L$(INCLUDE)/bwa -lbwa
# Directory organisation
# Directory organization
BASEDIR = .
BIN = $(BASEDIR)/bin
BUILD = $(BASEDIR)/build
......@@ -61,7 +61,7 @@ $(INCLUDE)/kfun/kfun.o: $(INCLUDE)/kfun/kfun.cpp
clean-kfun:
(rm $(INCLUDE)/kfun/kfun.o)
# Clean RADSex files
# Clean radsex files
clean:
rm -rf $(BUILD)/*.o
rm -rf $(BIN)/*
......@@ -69,12 +69,12 @@ clean:
# Clean all files
clean-all: clean clean-bwa clean-kfun
# Rebuild RADSex only
# Rebuild radsex only
rebuild:
$(MAKE) clean
$(MAKE) -j $(JOBS)
# Rebuild RADSex and dependencies
# Rebuild radsex and dependencies
rebuild-all:
$(MAKE) clean-all
$(MAKE) -j $(JOBS)
......@@ -87,7 +87,7 @@ $(BIN)/radsex: $(OBJS) $(INCLUDE)/kfun/kfun.o
$(BUILD)/%.o: $(SRC)/%.cpp $(INCLUDE)/bwa/libbwa.a
$(CXX) $(CXXFLAGS) -I $(INCLUDE) -c -o $@ $<
# Build doc with sphinx and doxygen
# Build doc with doxygen
docs:
(cd docs && make)
......
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