Commit bf1f5d08 authored by RomainFeron's avatar RomainFeron
Browse files

Updated comment lines

parent 8aac2719
...@@ -55,7 +55,7 @@ void Distrib::generate_output() { ...@@ -55,7 +55,7 @@ void Distrib::generate_output() {
// Generate the output file // Generate the output file
std::ofstream output_file = open_output(this->parameters.output_file_path); std::ofstream output_file = open_output(this->parameters.output_file_path);
output_file << "#source:distrib;min_depth:" << parameters.min_depth << output_file << "#source:radsex-distrib;min_depth:" << parameters.min_depth <<
";signif_threshold:" << parameters.signif_threshold << ";signif_threshold:" << parameters.signif_threshold <<
";bonferroni:" << std::boolalpha << (not parameters.disable_correction) << ";bonferroni:" << std::boolalpha << (not parameters.disable_correction) <<
";n_markers:" << this->results.n_markers << "\n"; ";n_markers:" << this->results.n_markers << "\n";
......
...@@ -50,7 +50,8 @@ void Signif::generate_output() { ...@@ -50,7 +50,8 @@ void Signif::generate_output() {
if (not this->parameters.output_fasta) { if (not this->parameters.output_fasta) {
output_file << "#source:radsex-signif;min_depth:" << parameters.min_depth << ";signif_threshold:" << parameters.signif_threshold << output_file << "#source:radsex-signif;min_depth:" << parameters.min_depth << ";signif_threshold:" << parameters.signif_threshold <<
";bonferroni:" << std::boolalpha << (not parameters.disable_correction) << "\n"; ";bonferroni:" << std::boolalpha << (not parameters.disable_correction) <<
";n_markers:" << this->results.n_markers << "\n";
output_file << print_list(this->markers_table.header.header, "\t") << "\n"; output_file << print_list(this->markers_table.header.header, "\t") << "\n";
} }
......
...@@ -56,7 +56,8 @@ void Subset::generate_output() { ...@@ -56,7 +56,8 @@ void Subset::generate_output() {
parameters.group2 << "=[" << parameters.subset_min_group2 << "," << parameters.subset_max_group2 << "]," << parameters.group2 << "=[" << parameters.subset_min_group2 << "," << parameters.subset_max_group2 << "]," <<
"individuals=[" << parameters.subset_min_individuals << "," << parameters.subset_max_individuals << "individuals=[" << parameters.subset_min_individuals << "," << parameters.subset_max_individuals <<
"];signif_threshold:" << parameters.signif_threshold << ";bonferroni:" << "];signif_threshold:" << parameters.signif_threshold << ";bonferroni:" <<
std::boolalpha << (not parameters.disable_correction) << "\n"; std::boolalpha << (not parameters.disable_correction) <<
";n_markers:" << this->results.n_markers << "\n";
this->output_file << print_list(this->markers_table.header.header, "\t") << "\n"; this->output_file << print_list(this->markers_table.header.header, "\t") << "\n";
......
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