Commit c0c18d7c authored by RomainFeron's avatar RomainFeron
Browse files

Finished first major doc update

parent b5ff6582
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html><head><title></title>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<meta name="generator" content="Doxygen 1.8.13"/>
<meta name="generator" content="Doxygen 1.8.17"/>
<link rel="stylesheet" type="text/css" href="search.css"/>
<script type="text/javascript" src="functions_a.js"></script>
<script type="text/javascript" src="search.js"></script>
......@@ -11,15 +11,19 @@
<div class="SRStatus" id="Loading">Loading...</div>
<div id="SRResults"></div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
createResults();
/* @license-end */
--></script>
<div class="SRStatus" id="Searching">Searching...</div>
<div class="SRStatus" id="NoMatches">No Matches</div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
document.getElementById("Loading").style.display="none";
document.getElementById("NoMatches").style.display="none";
var searchResults = new SearchResults("searchResults");
searchResults.Search();
/* @license-end */
--></script>
</div>
</body>
......
var searchData=
[
['parse_5fargs',['parse_args',['../main_8cpp.html#adc7388a240bcb7e9be17ee9c40235b15',1,'main.cpp']]],
['popmap',['Popmap',['../classPopmap.html#aa4b5134bef1644b97e42a586137df107',1,'Popmap::Popmap()'],['../classPopmap.html#a21fdd0de903399d80f5488ec543720c1',1,'Popmap::Popmap(Parameters &amp;parameters, bool check_groups=false)']]],
['print_5fending_5flog',['print_ending_log',['../classAnalysis.html#a4ea445a5e04a775edc7ed14effe737ad',1,'Analysis']]],
['print_5fgroups',['print_groups',['../classAnalysis.html#a2967c5ac0d5e431284a90559ecf72db8',1,'Analysis::print_groups()'],['../classPopmap.html#a7afcaf67a2b1efff572b2640cc31af4b',1,'Popmap::print_groups()']]],
['print_5flist',['print_list',['../utils_8h.html#ac5169aeb75bd397c83c20b965cfdbfc6',1,'utils.h']]],
['print_5fstarting_5flog',['print_starting_log',['../classAnalysis.html#ac004e11b85ddb125c7e7844ba2be728b',1,'Analysis']]],
['print_5ftime',['print_time',['../utils_8h.html#a2ccc3f59a22203b8b25cbd9489c5addc',1,'utils.h']]],
['process',['process',['../process_8cpp.html#aca1db66566c3a841900e42422a31736a',1,'process(Parameters &amp;parameters):&#160;process.cpp'],['../process_8h.html#aca1db66566c3a841900e42422a31736a',1,'process(Parameters &amp;parameters):&#160;process.cpp']]],
['process_5ffile',['process_file',['../process_8cpp.html#a50431291c9f5e8737719d7babc4dd97d',1,'process_file(InputFile &amp;input_file, std::unordered_map&lt; std::string, std::unordered_map&lt; std::string, uint16_t &gt;&gt; &amp;results, std::mutex &amp;results_mutex):&#160;process.cpp'],['../process_8h.html#a50431291c9f5e8737719d7babc4dd97d',1,'process_file(InputFile &amp;input_file, std::unordered_map&lt; std::string, std::unordered_map&lt; std::string, uint16_t &gt;&gt; &amp;results, std::mutex &amp;results_mutex):&#160;process.cpp']]],
['process_5fmarker',['process_marker',['../classAnalysis.html#ac2c749dc8512a6ef200042e59c4369bc',1,'Analysis::process_marker()'],['../classDepth.html#ae4dfa2cdf3e813701f4842af1f4de7d3',1,'Depth::process_marker()'],['../classDistrib.html#a1f78b878194bdc7a2b182c9b32d3eb33',1,'Distrib::process_marker()'],['../classFreq.html#a2b3d992be4c88bdb717313fba3b61646',1,'Freq::process_marker()'],['../classMap.html#a8fa38748c4e54b0dd974915a7a8711c9',1,'Map::process_marker()'],['../classSignif.html#ac06a653925053d81985a36dcf6e96ad2',1,'Signif::process_marker()'],['../classSubset.html#a546e6785585f2c3b25f8f1d53ac80cdf',1,'Subset::process_marker()']]],
['processor',['processor',['../classAnalysis.html#a51c4499fc36d5d27bdbb2cdeb30aee28',1,'Analysis']]]
['parse_5fargs_254',['parse_args',['../main_8cpp.html#adc7388a240bcb7e9be17ee9c40235b15',1,'main.cpp']]],
['popmap_255',['Popmap',['../classPopmap.html#aa4b5134bef1644b97e42a586137df107',1,'Popmap::Popmap()'],['../classPopmap.html#a21fdd0de903399d80f5488ec543720c1',1,'Popmap::Popmap(Parameters &amp;parameters, bool check_groups=false)']]],
['print_5fending_5flog_256',['print_ending_log',['../classAnalysis.html#a4ea445a5e04a775edc7ed14effe737ad',1,'Analysis']]],
['print_5fgroups_257',['print_groups',['../classAnalysis.html#a2967c5ac0d5e431284a90559ecf72db8',1,'Analysis::print_groups()'],['../classPopmap.html#a7afcaf67a2b1efff572b2640cc31af4b',1,'Popmap::print_groups()']]],
['print_5flist_258',['print_list',['../utils_8h.html#ac5169aeb75bd397c83c20b965cfdbfc6',1,'utils.h']]],
['print_5fstarting_5flog_259',['print_starting_log',['../classAnalysis.html#ac004e11b85ddb125c7e7844ba2be728b',1,'Analysis']]],
['print_5ftime_260',['print_time',['../utils_8h.html#a2ccc3f59a22203b8b25cbd9489c5addc',1,'utils.h']]],
['process_261',['process',['../process_8cpp.html#aca1db66566c3a841900e42422a31736a',1,'process(Parameters &amp;parameters):&#160;process.cpp'],['../process_8h.html#aca1db66566c3a841900e42422a31736a',1,'process(Parameters &amp;parameters):&#160;process.cpp']]],
['process_5ffile_262',['process_file',['../process_8cpp.html#a50431291c9f5e8737719d7babc4dd97d',1,'process_file(InputFile &amp;input_file, std::unordered_map&lt; std::string, std::unordered_map&lt; std::string, uint16_t &gt;&gt; &amp;results, std::mutex &amp;results_mutex):&#160;process.cpp'],['../process_8h.html#a50431291c9f5e8737719d7babc4dd97d',1,'process_file(InputFile &amp;input_file, std::unordered_map&lt; std::string, std::unordered_map&lt; std::string, uint16_t &gt;&gt; &amp;results, std::mutex &amp;results_mutex):&#160;process.cpp']]],
['process_5fmarker_263',['process_marker',['../classAnalysis.html#ac2c749dc8512a6ef200042e59c4369bc',1,'Analysis::process_marker()'],['../classDepth.html#ae4dfa2cdf3e813701f4842af1f4de7d3',1,'Depth::process_marker()'],['../classDistrib.html#a1f78b878194bdc7a2b182c9b32d3eb33',1,'Distrib::process_marker()'],['../classFreq.html#a2b3d992be4c88bdb717313fba3b61646',1,'Freq::process_marker()'],['../classMap.html#a8fa38748c4e54b0dd974915a7a8711c9',1,'Map::process_marker()'],['../classSignif.html#ac06a653925053d81985a36dcf6e96ad2',1,'Signif::process_marker()'],['../classSubset.html#a546e6785585f2c3b25f8f1d53ac80cdf',1,'Subset::process_marker()']]],
['processor_264',['processor',['../classAnalysis.html#a51c4499fc36d5d27bdbb2cdeb30aee28',1,'Analysis']]]
];
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html><head><title></title>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<meta name="generator" content="Doxygen 1.8.13"/>
<meta name="generator" content="Doxygen 1.8.17"/>
<link rel="stylesheet" type="text/css" href="search.css"/>
<script type="text/javascript" src="functions_b.js"></script>
<script type="text/javascript" src="search.js"></script>
......@@ -11,15 +11,19 @@
<div class="SRStatus" id="Loading">Loading...</div>
<div id="SRResults"></div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
createResults();
/* @license-end */
--></script>
<div class="SRStatus" id="Searching">Searching...</div>
<div class="SRStatus" id="NoMatches">No Matches</div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
document.getElementById("Loading").style.display="none";
document.getElementById("NoMatches").style.display="none";
var searchResults = new SearchResults("searchResults");
searchResults.Search();
/* @license-end */
--></script>
</div>
</body>
......
var searchData=
[
['reset',['reset',['../classMarker.html#aab6df7715be04663d229b2c255b5231e',1,'Marker']]],
['run',['run',['../classAnalysis.html#a8ef67dd0d4117235919b901dc578ce1e',1,'Analysis']]]
['reset_265',['reset',['../classMarker.html#aab6df7715be04663d229b2c255b5231e',1,'Marker']]],
['run_266',['run',['../classAnalysis.html#a8ef67dd0d4117235919b901dc578ce1e',1,'Analysis']]]
];
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html><head><title></title>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<meta name="generator" content="Doxygen 1.8.13"/>
<meta name="generator" content="Doxygen 1.8.17"/>
<link rel="stylesheet" type="text/css" href="search.css"/>
<script type="text/javascript" src="functions_c.js"></script>
<script type="text/javascript" src="search.js"></script>
......@@ -11,15 +11,19 @@
<div class="SRStatus" id="Loading">Loading...</div>
<div id="SRResults"></div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
createResults();
/* @license-end */
--></script>
<div class="SRStatus" id="Searching">Searching...</div>
<div class="SRStatus" id="NoMatches">No Matches</div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
document.getElementById("Loading").style.display="none";
document.getElementById("NoMatches").style.display="none";
var searchResults = new SearchResults("searchResults");
searchResults.Search();
/* @license-end */
--></script>
</div>
</body>
......
var searchData=
[
['set_5fcolumn_5fwidths',['set_column_widths',['../classCustomFormatter.html#a2578999ac91d0136d0349ebdeb3c6435',1,'CustomFormatter']]],
['set_5fpopmap',['set_popmap',['../classMarkersTable.html#ae80ae39dcaca919f152b3b4fe414099f',1,'MarkersTable']]],
['signif',['Signif',['../classSignif.html#a435863a16431abac30edc46f4e5eed5a',1,'Signif::Signif()'],['../classSignif.html#a16b4bc567128535d38770665d930c057',1,'Signif::Signif(Parameters &amp;parameters, bool compare_groups=true, bool store_groups=true, bool store_sequence=true)']]],
['split',['split',['../utils_8h.html#a02232c7faecfb8b131778dd2f77aa1c6',1,'utils.h']]],
['start_5fparser',['start_parser',['../classMarkersTable.html#a8a7cb5c1852a51b1f06240e1803c4d42',1,'MarkersTable']]],
['subset',['Subset',['../classSubset.html#a61c8b9ee0908e09b93c0931ff6a89bed',1,'Subset::Subset()'],['../classSubset.html#a5709daf43de161fc198e0ef8e586e312',1,'Subset::Subset(Parameters &amp;parameters, bool compare_groups=true, bool store_groups=true, bool store_sequence=true)']]]
['set_5fcolumn_5fwidths_267',['set_column_widths',['../classCustomFormatter.html#a2578999ac91d0136d0349ebdeb3c6435',1,'CustomFormatter']]],
['set_5fpopmap_268',['set_popmap',['../classMarkersTable.html#ae80ae39dcaca919f152b3b4fe414099f',1,'MarkersTable']]],
['signif_269',['Signif',['../classSignif.html#a435863a16431abac30edc46f4e5eed5a',1,'Signif::Signif()'],['../classSignif.html#a16b4bc567128535d38770665d930c057',1,'Signif::Signif(Parameters &amp;parameters, bool compare_groups=true, bool store_groups=true, bool store_sequence=true)']]],
['split_270',['split',['../utils_8h.html#a5786759f3550e82d7b8fe3e15dbf4af0',1,'utils.h']]],
['start_5fparser_271',['start_parser',['../classMarkersTable.html#a8a7cb5c1852a51b1f06240e1803c4d42',1,'MarkersTable']]],
['subset_272',['Subset',['../classSubset.html#a61c8b9ee0908e09b93c0931ff6a89bed',1,'Subset::Subset()'],['../classSubset.html#a5709daf43de161fc198e0ef8e586e312',1,'Subset::Subset(Parameters &amp;parameters, bool compare_groups=true, bool store_groups=true, bool store_sequence=true)']]]
];
docs/html/doxygen/search/mag_sel.png

563 Bytes | W: | H:

docs/html/doxygen/search/mag_sel.png

465 Bytes | W: | H:

docs/html/doxygen/search/mag_sel.png
docs/html/doxygen/search/mag_sel.png
docs/html/doxygen/search/mag_sel.png
docs/html/doxygen/search/mag_sel.png
  • 2-up
  • Swipe
  • Onion skin
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html><head><title></title>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<link rel="stylesheet" type="text/css" href="search.css"/>
......
/*
@licstart The following is the entire license notice for the
JavaScript code in this file.
Copyright (C) 1997-2017 by Dimitri van Heesch
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
@licend The above is the entire license notice
for the JavaScript code in this file
*/
function convertToId(search)
{
var result = '';
......@@ -788,4 +811,4 @@ function init_search()
}
searchBox.OnSelectItem(0);
}
/* @license-end */
docs/html/doxygen/search/search_l.png

604 Bytes | W: | H:

docs/html/doxygen/search/search_l.png

567 Bytes | W: | H:

docs/html/doxygen/search/search_l.png
docs/html/doxygen/search/search_l.png
docs/html/doxygen/search/search_l.png
docs/html/doxygen/search/search_l.png
  • 2-up
  • Swipe
  • Onion skin
docs/html/doxygen/search/search_r.png

612 Bytes | W: | H:

docs/html/doxygen/search/search_r.png

553 Bytes | W: | H:

docs/html/doxygen/search/search_r.png
docs/html/doxygen/search/search_r.png
docs/html/doxygen/search/search_r.png
docs/html/doxygen/search/search_r.png
  • 2-up
  • Swipe
  • Onion skin
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html><head><title></title>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<meta name="generator" content="Doxygen 1.8.13"/>
<meta name="generator" content="Doxygen 1.8.17"/>
<link rel="stylesheet" type="text/css" href="search.css"/>
<script type="text/javascript" src="variables_0.js"></script>
<script type="text/javascript" src="search.js"></script>
......@@ -11,15 +11,19 @@
<div class="SRStatus" id="Loading">Loading...</div>
<div id="SRResults"></div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
createResults();
/* @license-end */
--></script>
<div class="SRStatus" id="Searching">Searching...</div>
<div class="SRStatus" id="NoMatches">No Matches</div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
document.getElementById("Loading").style.display="none";
document.getElementById("NoMatches").style.display="none";
var searchResults = new SearchResults("searchResults");
searchResults.Search();
/* @license-end */
--></script>
</div>
</body>
......
var searchData=
[
['aligned_5fmarker',['aligned_marker',['../classMap.html#aeaebfd45719852317db9e7e3c7ecfbb5',1,'Map']]],
['aligned_5fmarkers',['aligned_markers',['../structMapResults.html#a426d143275dbe869e58c3b149f282a7b',1,'MapResults']]],
['alignment_5fresults',['alignment_results',['../classMap.html#ab565c5bae20f2e9fdb48996dfdac1b61',1,'Map']]]
['aligned_5fmarker_273',['aligned_marker',['../classMap.html#aeaebfd45719852317db9e7e3c7ecfbb5',1,'Map']]],
['aligned_5fmarkers_274',['aligned_markers',['../structMapResults.html#a426d143275dbe869e58c3b149f282a7b',1,'MapResults']]],
['alignment_5fresults_275',['alignment_results',['../classMap.html#ab565c5bae20f2e9fdb48996dfdac1b61',1,'Map']]]
];
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html><head><title></title>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<meta name="generator" content="Doxygen 1.8.13"/>
<meta name="generator" content="Doxygen 1.8.17"/>
<link rel="stylesheet" type="text/css" href="search.css"/>
<script type="text/javascript" src="variables_1.js"></script>
<script type="text/javascript" src="search.js"></script>
......@@ -11,15 +11,19 @@
<div class="SRStatus" id="Loading">Loading...</div>
<div id="SRResults"></div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
createResults();
/* @license-end */
--></script>
<div class="SRStatus" id="Searching">Searching...</div>
<div class="SRStatus" id="NoMatches">No Matches</div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
document.getElementById("Loading").style.display="none";
document.getElementById("NoMatches").style.display="none";
var searchResults = new SearchResults("searchResults");
searchResults.Search();
/* @license-end */
--></script>
</div>
</body>
......
var searchData=
[
['best_5falignment',['best_alignment',['../classMap.html#a3bb11a7a917041a6fb68c3a519caa56a',1,'Map']]],
['best_5falignments',['best_alignments',['../classMap.html#a2dddd9551d1622ea605f108c4dbf80d9',1,'Map']]],
['bias',['bias',['../structAlignedMarker.html#a8b812e8e2de2cf3f83ee80b668d9524b',1,'AlignedMarker']]],
['border_5fwidth',['border_width',['../classCustomFormatter.html#a8976f459918d11b5696efdb76dc2cff2',1,'CustomFormatter']]],
['bwa_5fmem_5foptions',['bwa_mem_options',['../classMap.html#aae23996321aaab154bec75427502137f',1,'Map']]]
['best_5falignment_276',['best_alignment',['../classMap.html#a3bb11a7a917041a6fb68c3a519caa56a',1,'Map']]],
['best_5falignments_277',['best_alignments',['../classMap.html#a2dddd9551d1622ea605f108c4dbf80d9',1,'Map']]],
['bias_278',['bias',['../structAlignedMarker.html#a8b812e8e2de2cf3f83ee80b668d9524b',1,'AlignedMarker']]],
['border_5fwidth_279',['border_width',['../classCustomFormatter.html#a8976f459918d11b5696efdb76dc2cff2',1,'CustomFormatter']]],
['bwa_5fmem_5foptions_280',['bwa_mem_options',['../classMap.html#aae23996321aaab154bec75427502137f',1,'Map']]]
];
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html><head><title></title>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<meta name="generator" content="Doxygen 1.8.13"/>
<meta name="generator" content="Doxygen 1.8.17"/>
<link rel="stylesheet" type="text/css" href="search.css"/>
<script type="text/javascript" src="variables_2.js"></script>
<script type="text/javascript" src="search.js"></script>
......@@ -11,15 +11,19 @@
<div class="SRStatus" id="Loading">Loading...</div>
<div id="SRResults"></div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
createResults();
/* @license-end */
--></script>
<div class="SRStatus" id="Searching">Searching...</div>
<div class="SRStatus" id="NoMatches">No Matches</div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
document.getElementById("Loading").style.display="none";
document.getElementById("NoMatches").style.display="none";
var searchResults = new SearchResults("searchResults");
searchResults.Search();
/* @license-end */
--></script>
</div>
</body>
......
var searchData=
[
['candidate_5fmarkers',['candidate_markers',['../structSignifResults.html#a5f27129d21aac037b5926eef1f3c18be',1,'SignifResults']]],
['chi_5fsquared',['chi_squared',['../classMap.html#a5ec9ce96607680f7eb08bbcb348af0a4',1,'Map']]],
['column_5fwidths',['column_widths',['../classCustomFormatter.html#abbcaea7bc716a16ed5fe23ed8caf5c9b',1,'CustomFormatter']]],
['command',['command',['../structParameters.html#acf51a3021f1aa0f5f7ed6ca63f729879',1,'Parameters']]],
['compare_5fgroups',['compare_groups',['../classAnalysis.html#a744305d7fed1cc583580c5920f0e39b2',1,'Analysis']]],
['contig',['contig',['../structAlignedMarker.html#a22f75ccfef97dda4382353fad33b5d6c',1,'AlignedMarker']]],
['contig_5flengths',['contig_lengths',['../classMap.html#aa1a4e7c0f0133483a2732f27bd0ef9da',1,'Map']]]
['candidate_5fmarkers_281',['candidate_markers',['../structSignifResults.html#a5f27129d21aac037b5926eef1f3c18be',1,'SignifResults']]],
['chi_5fsquared_282',['chi_squared',['../classMap.html#a5ec9ce96607680f7eb08bbcb348af0a4',1,'Map']]],
['column_5fwidths_283',['column_widths',['../classCustomFormatter.html#abbcaea7bc716a16ed5fe23ed8caf5c9b',1,'CustomFormatter']]],
['command_284',['command',['../structParameters.html#acf51a3021f1aa0f5f7ed6ca63f729879',1,'Parameters']]],
['compare_5fgroups_285',['compare_groups',['../classAnalysis.html#a744305d7fed1cc583580c5920f0e39b2',1,'Analysis']]],
['contig_286',['contig',['../structAlignedMarker.html#a22f75ccfef97dda4382353fad33b5d6c',1,'AlignedMarker']]],
['contig_5flengths_287',['contig_lengths',['../classMap.html#aa1a4e7c0f0133483a2732f27bd0ef9da',1,'Map']]]
];
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html><head><title></title>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<meta name="generator" content="Doxygen 1.8.13"/>
<meta name="generator" content="Doxygen 1.8.17"/>
<link rel="stylesheet" type="text/css" href="search.css"/>
<script type="text/javascript" src="variables_3.js"></script>
<script type="text/javascript" src="search.js"></script>
......@@ -11,15 +11,19 @@
<div class="SRStatus" id="Loading">Loading...</div>
<div id="SRResults"></div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
createResults();
/* @license-end */
--></script>
<div class="SRStatus" id="Searching">Searching...</div>
<div class="SRStatus" id="NoMatches">No Matches</div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
document.getElementById("Loading").style.display="none";
document.getElementById("NoMatches").style.display="none";
var searchResults = new SearchResults("searchResults");
searchResults.Search();
/* @license-end */
--></script>
</div>
</body>
......
var searchData=
[
['depths',['depths',['../structDepthResults.html#a5cc6408a27ba2fcd31ce3961a15b60a0',1,'DepthResults']]],
['disable_5fcorrection',['disable_correction',['../structParameters.html#a44b25c08718abd5476d0ee3eb2a1cec9',1,'Parameters']]],
['distribution',['distribution',['../structDistribResults.html#ab62f26915d0c81bfccbe92d974eabcf5',1,'DistribResults']]]
['depths_288',['depths',['../structDepthResults.html#a5cc6408a27ba2fcd31ce3961a15b60a0',1,'DepthResults']]],
['disable_5fcorrection_289',['disable_correction',['../structParameters.html#a44b25c08718abd5476d0ee3eb2a1cec9',1,'Parameters']]],
['distribution_290',['distribution',['../structDistribResults.html#ab62f26915d0c81bfccbe92d974eabcf5',1,'DistribResults']]]
];
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html><head><title></title>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<meta name="generator" content="Doxygen 1.8.13"/>
<meta name="generator" content="Doxygen 1.8.17"/>
<link rel="stylesheet" type="text/css" href="search.css"/>
<script type="text/javascript" src="variables_4.js"></script>
<script type="text/javascript" src="search.js"></script>
......@@ -11,15 +11,19 @@
<div class="SRStatus" id="Loading">Loading...</div>
<div id="SRResults"></div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
createResults();
/* @license-end */
--></script>
<div class="SRStatus" id="Searching">Searching...</div>
<div class="SRStatus" id="NoMatches">No Matches</div>
<script type="text/javascript"><!--
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
document.getElementById("Loading").style.display="none";
document.getElementById("NoMatches").style.display="none";
var searchResults = new SearchResults("searchResults");
searchResults.Search();
/* @license-end */
--></script>
</div>
</body>
......
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment