Statistics are now done in R when plotting the heatmap.
Test will be added again in this pipeline in a module to generate fasta file for significant sequences

First version of README
Added MIT License
Added install_packages.R script which installs packages required for visualization
Added examples directory with example plots

Dev

Working rescue module from dev

Implemented Rescue module: for a set of extracted haplotypes, find similar sequences in the catalog and group them in stacks (loci). Export coverage per individual for each sequence of each stack