Commits · d2c659db02babd280e3395f782720c91ba2f7633 · khalid / radsex

20 Apr, 2020 4 commits
- Merge branch 'dev' · d2c659db
  RomainFeron authored Apr 20, 2020
  
  d2c659db
- Cleaned up docs, removed sphinx doc that has been moved to sexgenomicstoolkit.github.io · 37accc95
  RomainFeron authored Apr 20, 2020
  
  37accc95
- Merged branch dev for 1.0.0 · 8968b5fb
  RomainFeron authored Apr 20, 2020
  
  8968b5fb
- Changed 'Pcorr' to 'CorrectedP' in map output for consistency · e5cade64
  RomainFeron authored Apr 20, 2020
  
  e5cade64
14 Apr, 2020 1 commit
- Changed Individual to Sample in depth output · bf04af63
  RomainFeron authored Apr 14, 2020
  
  bf04af63
13 Apr, 2020 5 commits
- Added corrected p-values output to subset · 3a7340ca
  RomainFeron authored Apr 13, 2020
  
  3a7340ca
- Updated doc · f74a72d0
  RomainFeron authored Apr 13, 2020
  
  f74a72d0
- Added number of reads per individual to output of 'depth' · 4e674e5f
  RomainFeron authored Apr 13, 2020
  
  4e674e5f
- Added header line to output of 'subset' · fad3f908
  RomainFeron authored Apr 13, 2020
  
  fad3f908
- Added corrected p-values in output · 053f9f20
  RomainFeron authored Apr 13, 2020
  
  053f9f20
30 Mar, 2020 1 commit
- Fixed bug in freq not exporting value for total number of individuals · f93730e3
  RomainFeron authored Mar 30, 2020
  
  f93730e3
11 Mar, 2020 1 commit
- Fixed bug in logs for process · ed85fdb0
  Romain Feron authored Mar 11, 2020
  
  ed85fdb0
02 Mar, 2020 6 commits
- Finished first major doc update · c0c18d7c
  RomainFeron authored Mar 02, 2020
  
  c0c18d7c
- Started updating doc · b5ff6582
  Romain Feron authored Mar 02, 2020
  
  b5ff6582
- Added doc makefile · 532cce3e
  Romain Feron authored Mar 02, 2020
  
  532cce3e
- Removed sphinx html output · 6d0d5c93
  Romain Feron authored Mar 02, 2020
  
  6d0d5c93
- removed doxygen html output · 27689d14
  Romain Feron authored Mar 02, 2020
  
  27689d14
- Test for building doxygen in readthedocs · d9d3ce73
  Romain Feron authored Mar 02, 2020
  
  d9d3ce73
01 Mar, 2020 5 commits
- Updated doc section 'getting started' · e509587d
  RomainFeron authored Mar 01, 2020
  
  e509587d
- Updated doc index · e147788e
  RomainFeron authored Mar 01, 2020
  
  e147788e
- Removed latex doxygen output · c0bbde48
  RomainFeron authored Mar 01, 2020
  
  c0bbde48
- Updated doc files · 4c5b2647
  RomainFeron authored Mar 01, 2020
  
  4c5b2647
- Refactoring complete + full header documentation for Doxygen · 1677244e
  RomainFeron authored Mar 01, 2020
  
  1677244e
28 Feb, 2020 1 commit
- Almost working depths after refactoring · 327a5ce4
  RomainFeron authored Feb 28, 2020
  
  327a5ce4
26 Feb, 2020 5 commits
- Started writing code documentation with doxygen · 3f3a30dc
  RomainFeron authored Feb 26, 2020
  
  3f3a30dc
- Merge branch 'docs' of github.com:RomainFeron/RadSex into docs · 60a96733
  RomainFeron authored Feb 26, 2020
  
  60a96733
- Started updating docs to match new CLI · b24883e1
  RomainFeron authored May 08, 2019
  
  b24883e1
- Updated qtcreator project file · 8e6e3050
  RomainFeron authored Feb 26, 2020
  
  8e6e3050
- Added license notice headers · 1c905c2c
  RomainFeron authored Feb 26, 2020
  
  1c905c2c
25 Feb, 2020 9 commits
- update qtcreator file · 9edc859f
  RomainFeron authored Feb 25, 2020
  
  9edc859f
- Moved distrib output to distrib cpp file, removed output.* files that are now... · 6b07685c
  RomainFeron authored Feb 25, 2020
```
Moved distrib output to distrib cpp file, removed output.* files that are now empty. Implemented computing bias in distrib
```
  6b07685c
- Implemented utility function to print containers, fixed header not printed in signif / subset · 91c28d79
  Romain Feron authored Feb 25, 2020
  
  91c28d79
- Fixed subset not computing max number of individuals + allowed to override popmap groups with -G · d89e7597
  Romain Feron authored Feb 25, 2020
  
  d89e7597
- Fixed bug with signif / subset not outputting sequence · 0b793ce8
  Romain Feron authored Feb 25, 2020
  
  0b793ce8
- More bugfix in depths function, added function to popmap to find an... · 2a898e5c
  Romain Feron authored Feb 25, 2020
```
More bugfix in depths function, added function to popmap to find an individual's group and return an empty string if not in popmap
```
  2a898e5c
- Fixed popmap issue in depths · 4cee4ee2
  Romain Feron authored Feb 25, 2020
  
  4cee4ee2
- More fixes to popmap loading + move popmap log before function started log · 49459e0a
  Romain Feron authored Feb 25, 2020
  
  49459e0a
- Fixed popmap loading bugs. Small cleanup to logs format · a5605685
  Romain Feron authored Feb 25, 2020
  
  a5605685
24 Feb, 2020 2 commits
- Better makefile · 632ae061
  RomainFeron authored Feb 24, 2020
  
  632ae061
- Implemented progress bars - why not · c8b7db83
  RomainFeron authored Feb 24, 2020
  
  c8b7db83