Commit beec971f authored by khalid's avatar khalid
Browse files

typo in if

parent 8f393fa2
......@@ -38,7 +38,7 @@ rule <step_name>__FROGS_filter_affiliation:
{params.min_blast_identity} \
{params.min_blast_coverage}
echo \"1\t./{params.stepDir}/filtAff_report.html\" > {params.outDir}/text.generic.tsv;
if [ "{params.output_mode}" == "--mask" ]; cp {input.fasta} {params.outDir}/affiFilter_sequences.fasta fi;
if [ "{params.output_mode}" == "--mask" ]; then cp {input.fasta} {params.outDir}/affiFilter_sequences.fasta; fi;
"""
# {params.taxonomic_ranks} \
\ No newline at end of file
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