Commit df1cf15b authored by mmassaviol's avatar mmassaviol
Browse files

first commit

parent c5f2dc6b
......@@ -4,7 +4,8 @@
# It is used to apply parameters specific to the current deployment.
# It is executed secondly during a cloud deployement in IFB-Biosphere, after the *Installation* phase.
APP_IMG="long_read_assembly"
APP_IMG="gitlab-registry.in2p3.fr/ifb-biosphere/apps/long_read_assembly:master"
# Tuning if site proxy or not
CLOUD_SERVICE = $(ss-get cloudservice)
......@@ -66,6 +67,10 @@ done < /etc/auto.ifb_share
IFS=$IFS_ORI
# Run docker environment
# pull from docker hub or comment following 2 lines if using a local registry
docker pull mmassaviol/long_read_assembly
APP_IMG="long_read_assembly"
CONTAINER_ID=$( docker run -d -p $APP_PORT:8787 $APP_IMG )
#docker exec --user rstudio $CONTAINER_ID bash -c 'ln -s /ifb/data/ $HOME/data'
#docker exec --user rstudio $CONTAINER_ID bash -c 'rm -r $HOME/kitematic'
......
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