Debug label error

files/params.total.yml

@@ -34,7 +34,7 @@ params_info:
     tool: tlex3
     rule: tlex3
     type: input_file
-    label: Path to reference genome fasta file
+    label: Path to TE_list
   tlex3_te_annotations_select:
     tool: tlex3
     rule: tlex3
@@ -43,7 +43,7 @@ params_info:
     tool: tlex3
     rule: tlex3
     type: input_file
-    label: Path to reference genome fasta file
+    label: Path to TE_annotations
   tlex3_genome_fasta_select:
     tool: tlex3
     rule: tlex3

sagApp/pages/pages_def_tlex3.R

@@ -3,32 +3,32 @@ tabtlex3 = fluidPage(
 box(title = "Parameters :", width = 12, status = "primary", collapsible = TRUE, solidHeader = TRUE,
 
 	hidden(textInput("selecttlex3", label = "", value="tlex3")),box(title = "T-lex3", width = 12, status = "success", collapsible = TRUE, solidHeader = TRUE,
-	box(title = "Path to reference genome fasta file", width = 12, status = "success", collapsible = TRUE, solidHeader = TRUE,
+	box(title = "Path to TE_list", width = 12, status = "success", collapsible = TRUE, solidHeader = TRUE,
 		selectInput("tlex3_te_list_select",label = "Select where to find the file", selected = "server", choices = c("On server" = "server", "On your machine" = "local")),
 		conditionalPanel(condition = "input.tlex3_te_list_select == 'server'",
-				tags$label("Path to reference genome fasta file"),
+				tags$label("Path to TE_list"),
 				fluidRow(
-					column(4,shinyFilesButton("shinyfiles_tlex3_te_list",label="Please select a file", title="Path to reference genome fasta file", multiple=FALSE)),
+					column(4,shinyFilesButton("shinyfiles_tlex3_te_list",label="Please select a file", title="Path to TE_list", multiple=FALSE)),
 					column(8,textInput("tlex3_te_list_server",label=NULL,value=""))
 				)
 			),
 		conditionalPanel(condition = "input.tlex3_te_list_select == 'local'",
-			fileInput("tlex3_te_list_local",label = "Path to reference genome fasta file")
+			fileInput("tlex3_te_list_local",label = "Path to TE_list")
 		)
 	)
 ,
 
-	box(title = "Path to reference genome fasta file", width = 12, status = "success", collapsible = TRUE, solidHeader = TRUE,
+	box(title = "Path to TE_annotations", width = 12, status = "success", collapsible = TRUE, solidHeader = TRUE,
 		selectInput("tlex3_te_annotations_select",label = "Select where to find the file", selected = "server", choices = c("On server" = "server", "On your machine" = "local")),
 		conditionalPanel(condition = "input.tlex3_te_annotations_select == 'server'",
-				tags$label("Path to reference genome fasta file"),
+				tags$label("Path to TE_annotations"),
 				fluidRow(
-					column(4,shinyFilesButton("shinyfiles_tlex3_te_annotations",label="Please select a file", title="Path to reference genome fasta file", multiple=FALSE)),
+					column(4,shinyFilesButton("shinyfiles_tlex3_te_annotations",label="Please select a file", title="Path to TE_annotations", multiple=FALSE)),
 					column(8,textInput("tlex3_te_annotations_server",label=NULL,value=""))
 				)
 			),
 		conditionalPanel(condition = "input.tlex3_te_annotations_select == 'local'",
-			fileInput("tlex3_te_annotations_local",label = "Path to reference genome fasta file")
+			fileInput("tlex3_te_annotations_local",label = "Path to TE_annotations")
 		)
 	)
 ,