debug blastn

tools/blastn/blastn.rule.snakefile

@@ -8,8 +8,8 @@ def <step_name>__db():
         db_path = os.path.dirname(files[0])
     # if from makeblastdb step
     else:
-        db_name = os.path.basename(os.path.splitext(input.blastdb[0])[0])
-        db_path = os.path.dirname(input.blastdb[0])
+        db_name = os.path.basename(os.path.splitext(input.<step_name>__makeblastdb[0])[0])
+        db_path = os.path.dirname(input.<step_name>__makeblastdb[0])
     
     return { "db_name": db_name, "db_path": db_path }
 

tools/hisat2/hisat2.yaml

 {
   id: hisat2,
-  name: Bowtie2,
+  name: Howtie2,
   article: Kim, D., Paggi, J.M., Park, C. et al. Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype. Nat Biotechnol 37, 907-915 (2019).,
   website: "http://daehwankimlab.github.io/hisat2/",
   git: "http://daehwankimlab.github.io/hisat2/",